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The map label for this gene is 17229800

Identifier: 17229800

GI number: 17229800

Start: 2780723

End: 2782000

Strand: Direct

Name: 17229800

Synonym: alr2308

Alternate gene names: NA

Gene position: 2780723-2782000 (Clockwise)

Preceding gene: 17229799

Following gene: 17229801

Centisome position: 43.36

GC content: 48.36

Gene sequence:

>1278_bases
GTGACTGATCTGTTAGCCCCTTTACAATCATTAAACCAAGGTCACTGGTTCAAGCTCATCTGCGGAGCTAGTTTCCAGCA
CCTACCTGCTGTGAGAAGTTTAACATTAGCCTACACCTTAGCTGGTGCTGACTGCATAGATGTGGCTGCTGACCCAGCCG
TGATTAGAGATGCCAAAGAAGCAATACAAGTAGCTAGAAATTTGGTGCAGGCAGCTCAAGCAAGAGGACTGGACTACAAA
GGTCATGCACCCTTGTTGATGGTCAGCTTAAATGACGGAGAAGACCCCCATTTCCGCAAAGCCGAATTCAATCCCCACCA
TTGTCCCTCTGATTGTCCCAGACCTTGCGAGAAAATCTGCCCCGCTCAGGCAATTGTATTTAATCATCAAAAAGATAATT
TTTCTGGAGTTGAATCTCAGAAATGCTACGGTTGTGGGCGTTGTCTGCCAGTTTGTCCTTATGATATAATTTATACAAAT
TCCTATATGTCACCGCCAGAAGCGATCGCGCCAATGGTTTTGTCAGCAGGAATAGATGCCGTAGAAATCCATACAAAAGT
GGGACGTTTGGCAGAGTTTAAGCAATTATGGCAAGTAATTTCACCTTGGGCAGACCAACTGAAGGTATTGGCTATCAGCT
GTCCCGATGGCAAACATCTAGTTGAATATCTCCAATCAATCTATGAACTAATTTCTCCACTTCCTACCACCTTAATTTGG
CAAACCGACGGTCGCCCCATGAGTGGTGATATTGGAGATGGTACCACTTTAGCAGCAGTGAAACTAGGGCAAAAAGTTCT
AGCAGCTAAGTTACCAGGATATATACAACTAGCAGGTGGCACTAACAGCTACACAGTTGCTAAGTTAAAGGCAATGGGAC
TACTGAAAAAAGCAAGGGAGCAGGGAGCAGGAAGAGAAGTCGCAAGGAGGGAAACCCTCCGGGCGAACTTCCCTACGGGA
CGCTACGCGAACGGGAGCATGGGGGAAATTTCTTCTCCTCTGCCCCCTGCCCTTCGGGTTCGCAGTCGCTTATGGGGGAA
ACCCCCAAGACCGCGCTGTCTCACCTCCCGCCCCTCCGCCTCCATTGCCGGAGTTGCTTACGGTAGCTACGCCCGTGTAA
TGCTGTCACCGATTATTGAGCAGTTAGAAAATAAGGAGGTGAGTAATAGCAGTGTTAAGGCCACAGTACGCCTTGAAGAA
GAACCAGAATTGCTTTGGCAAGCCGTAGAGCTTGCCCGTTCCCTCGTCTCCCAGCTCAAGTCACAGCAGGAGAGCTAA

Upstream 100 bases:

>100_bases
TCTGAGTAGAAAGGGCTGAGTCAAATGACACTACAAATAAATTAGGATTTTTAGTCAACACAGGCTACTATTTTCATTCA
CATAAAAGCATAATAGAAGT

Downstream 100 bases:

>100_bases
TCGCTCTTCGTTATCTCTCAAAACGTCACAATAGAAAGCATGACGACTACAGACGATCTCCAAAAGTTGTTAGACATTTT
GCCCCAAGACCTGCGACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: LdpA Protein; Ferredoxin; 4Fe-4S Ferredoxin; Light Dependent Period; Ferredoxin 4Fe-4S Type; Alpha-Helical Ferredoxin

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MTDLLAPLQSLNQGHWFKLICGASFQHLPAVRSLTLAYTLAGADCIDVAADPAVIRDAKEAIQVARNLVQAAQARGLDYK
GHAPLLMVSLNDGEDPHFRKAEFNPHHCPSDCPRPCEKICPAQAIVFNHQKDNFSGVESQKCYGCGRCLPVCPYDIIYTN
SYMSPPEAIAPMVLSAGIDAVEIHTKVGRLAEFKQLWQVISPWADQLKVLAISCPDGKHLVEYLQSIYELISPLPTTLIW
QTDGRPMSGDIGDGTTLAAVKLGQKVLAAKLPGYIQLAGGTNSYTVAKLKAMGLLKKAREQGAGREVARRETLRANFPTG
RYANGSMGEISSPLPPALRVRSRLWGKPPRPRCLTSRPSASIAGVAYGSYARVMLSPIIEQLENKEVSNSSVKATVRLEE
EPELLWQAVELARSLVSQLKSQQES

Sequences:

>Translated_425_residues
MTDLLAPLQSLNQGHWFKLICGASFQHLPAVRSLTLAYTLAGADCIDVAADPAVIRDAKEAIQVARNLVQAAQARGLDYK
GHAPLLMVSLNDGEDPHFRKAEFNPHHCPSDCPRPCEKICPAQAIVFNHQKDNFSGVESQKCYGCGRCLPVCPYDIIYTN
SYMSPPEAIAPMVLSAGIDAVEIHTKVGRLAEFKQLWQVISPWADQLKVLAISCPDGKHLVEYLQSIYELISPLPTTLIW
QTDGRPMSGDIGDGTTLAAVKLGQKVLAAKLPGYIQLAGGTNSYTVAKLKAMGLLKKAREQGAGREVARRETLRANFPTG
RYANGSMGEISSPLPPALRVRSRLWGKPPRPRCLTSRPSASIAGVAYGSYARVMLSPIIEQLENKEVSNSSVKATVRLEE
EPELLWQAVELARSLVSQLKSQQES
>Mature_424_residues
TDLLAPLQSLNQGHWFKLICGASFQHLPAVRSLTLAYTLAGADCIDVAADPAVIRDAKEAIQVARNLVQAAQARGLDYKG
HAPLLMVSLNDGEDPHFRKAEFNPHHCPSDCPRPCEKICPAQAIVFNHQKDNFSGVESQKCYGCGRCLPVCPYDIIYTNS
YMSPPEAIAPMVLSAGIDAVEIHTKVGRLAEFKQLWQVISPWADQLKVLAISCPDGKHLVEYLQSIYELISPLPTTLIWQ
TDGRPMSGDIGDGTTLAAVKLGQKVLAAKLPGYIQLAGGTNSYTVAKLKAMGLLKKAREQGAGREVARRETLRANFPTGR
YANGSMGEISSPLPPALRVRSRLWGKPPRPRCLTSRPSASIAGVAYGSYARVMLSPIIEQLENKEVSNSSVKATVRLEEE
PELLWQAVELARSLVSQLKSQQES

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46349; Mature: 46218

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLAPLQSLNQGHWFKLICGASFQHLPAVRSLTLAYTLAGADCIDVAADPAVIRDAKE
CCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCHHHHCCCCHHHHHHHH
AIQVARNLVQAAQARGLDYKGHAPLLMVSLNDGEDPHFRKAEFNPHHCPSDCPRPCEKIC
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHC
PAQAIVFNHQKDNFSGVESQKCYGCGRCLPVCPYDIIYTNSYMSPPEAIAPMVLSAGIDA
CCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC
VEIHTKVGRLAEFKQLWQVISPWADQLKVLAISCPDGKHLVEYLQSIYELISPLPTTLIW
EEHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEE
QTDGRPMSGDIGDGTTLAAVKLGQKVLAAKLPGYIQLAGGTNSYTVAKLKAMGLLKKARE
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
QGAGREVARRETLRANFPTGRYANGSMGEISSPLPPALRVRSRLWGKPPRPRCLTSRPSA
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
SIAGVAYGSYARVMLSPIIEQLENKEVSNSSVKATVRLEEEPELLWQAVELARSLVSQLK
CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
SQQES
HHCCC
>Mature Secondary Structure 
TDLLAPLQSLNQGHWFKLICGASFQHLPAVRSLTLAYTLAGADCIDVAADPAVIRDAKE
CHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCHHHHCCCCHHHHHHHH
AIQVARNLVQAAQARGLDYKGHAPLLMVSLNDGEDPHFRKAEFNPHHCPSDCPRPCEKIC
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHC
PAQAIVFNHQKDNFSGVESQKCYGCGRCLPVCPYDIIYTNSYMSPPEAIAPMVLSAGIDA
CCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC
VEIHTKVGRLAEFKQLWQVISPWADQLKVLAISCPDGKHLVEYLQSIYELISPLPTTLIW
EEHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEE
QTDGRPMSGDIGDGTTLAAVKLGQKVLAAKLPGYIQLAGGTNSYTVAKLKAMGLLKKARE
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
QGAGREVARRETLRANFPTGRYANGSMGEISSPLPPALRVRSRLWGKPPRPRCLTSRPSA
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
SIAGVAYGSYARVMLSPIIEQLENKEVSNSSVKATVRLEEEPELLWQAVELARSLVSQLK
CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
SQQES
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA