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The map label for this gene is 17229794

Identifier: 17229794

GI number: 17229794

Start: 2771978

End: 2773150

Strand: Reverse

Name: 17229794

Synonym: all2302

Alternate gene names: NA

Gene position: 2773150-2771978 (Counterclockwise)

Preceding gene: 17229795

Following gene: 17229791

Centisome position: 43.24

GC content: 39.98

Gene sequence:

>1173_bases
ATGTCCTTCAAAATATTGAGTCTGGATGGCGGCGGTATACGCGGCGTTATTACAGCACGCATCCTTCAAGAAGTGGAGCG
ACAGATTCAACAGCAGCAAGGTAAGTCCTTACACGAATACTTTGATTTAATTGCCGGCACTTCCACGGGTTCCATATTAA
CGGCTGGAATTGCCGCGAAAAAAAATAGCAGTGAGCTAGTTCAACTGTATCAGGAACAAGGTAAGCAAATATTTCCTATC
GAGAGAAAAGAACGCTACAAAAAAATTCCCAGTTTCCTACAACCATTGATTGAAGCCTTTTCACTACCTAAATATTCTCA
TCAAGGGCTGATTAATGTCCTGAAAAATGTTTTGGGTGACACAAGAATTAAGGATGTGGAAAGCCCGATAATGTTGATTC
TCGCTTACGATACTCTTTATCGCAACACAACATTTTTTACTAATTGTCACCCCGATTTAGGCGATAGATGGTATGATGAT
TGTCATCTATGGGAAATTTGTACCGCTTCAACCGCAGCTCCTACCTTCTTTCCCCCATATAAGTTAGAGCCTGTAAATAA
AGAAAAATATGGAAATTGGGTATTCCCTCACATTGATGGGGGAGTTGCGGCCAATAACCCAGCACTAGCTGCACTCAGCT
TGGTAATGCGGTTGTCTCAATCTTCTGTCTCCTCTGCAATCAAACAAAAATATAATTTGGATGGGATCAATTTAGAAGAT
ATTGCCATCCTTTCTATTGGTACTGGTCAAACTGGTGAACCATATTTATTTGATCAGGTGCAAAATTGGCGTGGCCTAGA
TTGGGCGCAACATCTGATTGATATATTTATGGAGCCGACATCTGAAGTTAGTAGTACAATTTGCCGTCAAATTATGGGCG
GATTTAATTCTCAAAGATATTTACGTCTTCAGTTTGATTTAAATGAAAGATTTCAACCTCACAAAGTGGAATCTTACAAA
GACACTCGTCAAGTCCTCAAACCAGGAGAAAGAGTTAACAGATTTACCCAAACTCCGCTTACAGAAGAGATGGATGACAC
GAGGGACGACATTTTGAGATATCTAATCGATGCCACATCTAAGTTTATTGATAAAGGTTATACTTTCTATACCAGAAATG
ACTGTGGACCTCAGGTGAAAGATGCGATCGCATCTTTTATTCAAGCTAACTAG

Upstream 100 bases:

>100_bases
ATATTCTCTGATTACGTAGATTACAACTGTAAAACAGATTTAGGCGACAGAAATTATTCTTCCCTGATCCCCAGCCCCTA
ATCTACCAAGGAGAATCAAA

Downstream 100 bases:

>100_bases
CATATTTACGTAAAAAGTTCTATCCCTACCAGGGTCAGTATTGTTTCGGTGATCAGTAGTATTTGCGTAGTCCGCCTCGT
GAAGCATGGTAGAAATAGCA

Product: patatin-like protein

Products: NA

Alternate protein names: Patatin Family Protein; Phospholipase Patatin Family; Patatin-Like Protein; Patatin-Related Protein; Patatin-Like Phospholipase Family; Phospholipase

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSFKILSLDGGGIRGVITARILQEVERQIQQQQGKSLHEYFDLIAGTSTGSILTAGIAAKKNSSELVQLYQEQGKQIFPI
ERKERYKKIPSFLQPLIEAFSLPKYSHQGLINVLKNVLGDTRIKDVESPIMLILAYDTLYRNTTFFTNCHPDLGDRWYDD
CHLWEICTASTAAPTFFPPYKLEPVNKEKYGNWVFPHIDGGVAANNPALAALSLVMRLSQSSVSSAIKQKYNLDGINLED
IAILSIGTGQTGEPYLFDQVQNWRGLDWAQHLIDIFMEPTSEVSSTICRQIMGGFNSQRYLRLQFDLNERFQPHKVESYK
DTRQVLKPGERVNRFTQTPLTEEMDDTRDDILRYLIDATSKFIDKGYTFYTRNDCGPQVKDAIASFIQAN

Sequences:

>Translated_390_residues
MSFKILSLDGGGIRGVITARILQEVERQIQQQQGKSLHEYFDLIAGTSTGSILTAGIAAKKNSSELVQLYQEQGKQIFPI
ERKERYKKIPSFLQPLIEAFSLPKYSHQGLINVLKNVLGDTRIKDVESPIMLILAYDTLYRNTTFFTNCHPDLGDRWYDD
CHLWEICTASTAAPTFFPPYKLEPVNKEKYGNWVFPHIDGGVAANNPALAALSLVMRLSQSSVSSAIKQKYNLDGINLED
IAILSIGTGQTGEPYLFDQVQNWRGLDWAQHLIDIFMEPTSEVSSTICRQIMGGFNSQRYLRLQFDLNERFQPHKVESYK
DTRQVLKPGERVNRFTQTPLTEEMDDTRDDILRYLIDATSKFIDKGYTFYTRNDCGPQVKDAIASFIQAN
>Mature_389_residues
SFKILSLDGGGIRGVITARILQEVERQIQQQQGKSLHEYFDLIAGTSTGSILTAGIAAKKNSSELVQLYQEQGKQIFPIE
RKERYKKIPSFLQPLIEAFSLPKYSHQGLINVLKNVLGDTRIKDVESPIMLILAYDTLYRNTTFFTNCHPDLGDRWYDDC
HLWEICTASTAAPTFFPPYKLEPVNKEKYGNWVFPHIDGGVAANNPALAALSLVMRLSQSSVSSAIKQKYNLDGINLEDI
AILSIGTGQTGEPYLFDQVQNWRGLDWAQHLIDIFMEPTSEVSSTICRQIMGGFNSQRYLRLQFDLNERFQPHKVESYKD
TRQVLKPGERVNRFTQTPLTEEMDDTRDDILRYLIDATSKFIDKGYTFYTRNDCGPQVKDAIASFIQAN

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI48525351, Length=226, Percent_Identity=27.8761061946903, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17567809, Length=250, Percent_Identity=27.6, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17551040, Length=260, Percent_Identity=26.9230769230769, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17544092, Length=225, Percent_Identity=30.2222222222222, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17541042, Length=301, Percent_Identity=25.5813953488372, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44345; Mature: 44214

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKILSLDGGGIRGVITARILQEVERQIQQQQGKSLHEYFDLIAGTSTGSILTAGIAAK
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHCC
KNSSELVQLYQEQGKQIFPIERKERYKKIPSFLQPLIEAFSLPKYSHQGLINVLKNVLGD
CCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
TRIKDVESPIMLILAYDTLYRNTTFFTNCHPDLGDRWYDDCHLWEICTASTAAPTFFPPY
CHHHHHCCCEEEEEEHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
KLEPVNKEKYGNWVFPHIDGGVAANNPALAALSLVMRLSQSSVSSAIKQKYNLDGINLED
CCCCCCHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IAILSIGTGQTGEPYLFDQVQNWRGLDWAQHLIDIFMEPTSEVSSTICRQIMGGFNSQRY
EEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEE
LRLQFDLNERFQPHKVESYKDTRQVLKPGERVNRFTQTPLTEEMDDTRDDILRYLIDATS
EEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH
KFIDKGYTFYTRNDCGPQVKDAIASFIQAN
HHHHCCCEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFKILSLDGGGIRGVITARILQEVERQIQQQQGKSLHEYFDLIAGTSTGSILTAGIAAK
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHCC
KNSSELVQLYQEQGKQIFPIERKERYKKIPSFLQPLIEAFSLPKYSHQGLINVLKNVLGD
CCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
TRIKDVESPIMLILAYDTLYRNTTFFTNCHPDLGDRWYDDCHLWEICTASTAAPTFFPPY
CHHHHHCCCEEEEEEHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
KLEPVNKEKYGNWVFPHIDGGVAANNPALAALSLVMRLSQSSVSSAIKQKYNLDGINLED
CCCCCCHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IAILSIGTGQTGEPYLFDQVQNWRGLDWAQHLIDIFMEPTSEVSSTICRQIMGGFNSQRY
EEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEE
LRLQFDLNERFQPHKVESYKDTRQVLKPGERVNRFTQTPLTEEMDDTRDDILRYLIDATS
EEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH
KFIDKGYTFYTRNDCGPQVKDAIASFIQAN
HHHHCCCEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA