Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17229753

Identifier: 17229753

GI number: 17229753

Start: 2720748

End: 2721356

Strand: Direct

Name: 17229753

Synonym: alr2261

Alternate gene names: NA

Gene position: 2720748-2721356 (Clockwise)

Preceding gene: 17229751

Following gene: 17229756

Centisome position: 42.42

GC content: 39.57

Gene sequence:

>609_bases
GTGTTTGCTCCGCCAGGCATAGCAGCTATAGCGATTTCCCGCTATCAATATATTCCTTTATTCCCTTTAATTGGTGTGAA
TAATTTGCGTTGCGTTTTCATTACCCGCGAGGACAGCAACATCCGTGATTTGCAAGATTTACAGCGTAAAACAGTAGCTC
TAGGACAATTAGGTTCAGCTACAGGATATTATTTACCGCTTTATAATCTTTATGGTCTAACGCTGGCTGAAATTTTGTCT
GCACCTACACCAAAAACTATTATGGAATGGGTAGCTGAAGGAAAAGCAGCAGCTGGTGCTGTTTCTATGGCAGAATTTAA
TCTTTATAGCTCAAAATTCCCAGGAACTAAATTTCGTATCCTCTACACAGATCCCCATTATGTTCCACCTGGTGTTGTGT
TGATGGAATCAACTATAGAAAGCAAACGCCAAGAATTCATTCGCAAAGTTATGAGTGAGTTTCCTTCAACTTCAGCGCAA
GAGATTGGCTATATACCCAATGCACAAGTCCCAAATTACAAATACATGATTAGTGTGGTGGAACGAGTACAGCCAATTGC
TTCTCAATTGCAAAGTAAGCCGGTGCAGTTATTTAATAAAACAATTTAA

Upstream 100 bases:

>100_bases
GCGTTATTTAGGAGAAAGAACAAAAGCTAAGATTACTTTAGAACCTACTTTTAATGAAAATAAAGCGATTGAGCGCCTAG
AATCTCGTGCTTGGTCATTA

Downstream 100 bases:

>100_bases
ATTTTTGTCGGCGAGAGAGTTTAGGGACTAGAGTTGAGAAAAGTATTTAAGTGCGAAACCCTACCTCGTTTTGGCTGATA
GCAAAATTAAGTAGGACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MFAPPGIAAIAISRYQYIPLFPLIGVNNLRCVFITREDSNIRDLQDLQRKTVALGQLGSATGYYLPLYNLYGLTLAEILS
APTPKTIMEWVAEGKAAAGAVSMAEFNLYSSKFPGTKFRILYTDPHYVPPGVVLMESTIESKRQEFIRKVMSEFPSTSAQ
EIGYIPNAQVPNYKYMISVVERVQPIASQLQSKPVQLFNKTI

Sequences:

>Translated_202_residues
MFAPPGIAAIAISRYQYIPLFPLIGVNNLRCVFITREDSNIRDLQDLQRKTVALGQLGSATGYYLPLYNLYGLTLAEILS
APTPKTIMEWVAEGKAAAGAVSMAEFNLYSSKFPGTKFRILYTDPHYVPPGVVLMESTIESKRQEFIRKVMSEFPSTSAQ
EIGYIPNAQVPNYKYMISVVERVQPIASQLQSKPVQLFNKTI
>Mature_202_residues
MFAPPGIAAIAISRYQYIPLFPLIGVNNLRCVFITREDSNIRDLQDLQRKTVALGQLGSATGYYLPLYNLYGLTLAEILS
APTPKTIMEWVAEGKAAAGAVSMAEFNLYSSKFPGTKFRILYTDPHYVPPGVVLMESTIESKRQEFIRKVMSEFPSTSAQ
EIGYIPNAQVPNYKYMISVVERVQPIASQLQSKPVQLFNKTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22562; Mature: 22562

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAPPGIAAIAISRYQYIPLFPLIGVNNLRCVFITREDSNIRDLQDLQRKTVALGQLGSA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC
TGYYLPLYNLYGLTLAEILSAPTPKTIMEWVAEGKAAAGAVSMAEFNLYSSKFPGTKFRI
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCHHHHHHHHHHHCCCCCCEEEE
LYTDPHYVPPGVVLMESTIESKRQEFIRKVMSEFPSTSAQEIGYIPNAQVPNYKYMISVV
EEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHH
ERVQPIASQLQSKPVQLFNKTI
HHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MFAPPGIAAIAISRYQYIPLFPLIGVNNLRCVFITREDSNIRDLQDLQRKTVALGQLGSA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC
TGYYLPLYNLYGLTLAEILSAPTPKTIMEWVAEGKAAAGAVSMAEFNLYSSKFPGTKFRI
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCHHHHHHHHHHHCCCCCCEEEE
LYTDPHYVPPGVVLMESTIESKRQEFIRKVMSEFPSTSAQEIGYIPNAQVPNYKYMISVV
EEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHH
ERVQPIASQLQSKPVQLFNKTI
HHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA