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The map label for this gene is gvpB [H]

Identifier: 17229745

GI number: 17229745

Start: 2706132

End: 2706347

Strand: Reverse

Name: gvpB [H]

Synonym: asl2253

Alternate gene names: 17229745

Gene position: 2706347-2706132 (Counterclockwise)

Preceding gene: 17229746

Following gene: 17229744

Centisome position: 42.2

GC content: 42.59

Gene sequence:

>216_bases
ATGGCAGTCGAAAAAACCAATTCTTCTTCAAGCTTGGCAGAAGTTATTGACCGTATCTTAGATAAAGGTATCGTCGTAGA
TGCTTGGGTACGTGTTTCTCTAGTTGGTATTGAACTACTTGCAATCGAAGCTCGTATCGTCATTGCTTCCGTTGAAACCT
ACCTGAAATATGCAGAAGCTGTAGGTCTAACACAATCCGCCGCTATGCCTGCTTAA

Upstream 100 bases:

>100_bases
TAAGTAGATTCGAGAATATCTTAATTCTTAATAGGAAATTAAGATATTCTACTCCCGACCAGATAAATGTAAACACAACA
ATAGCTTAAGGTACAAAATC

Downstream 100 bases:

>100_bases
TTATTAAGTAGGTGTAAAAAATCAGAATTATTACTTAAATAATTCTGGTTTATAATCTGTTTTTGGCAAGTATTTTGATG
CTTTCCAATCAGATTTATCA

Product: gas vesicle synthesis protein GvpA

Products: NA

Alternate protein names: GVP [H]

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MAVEKTNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARIVIASVETYLKYAEAVGLTQSAAMPA

Sequences:

>Translated_71_residues
MAVEKTNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARIVIASVETYLKYAEAVGLTQSAAMPA
>Mature_70_residues
AVEKTNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARIVIASVETYLKYAEAVGLTQSAAMPA

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the st

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 7547; Mature: 7416

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00234 GAS_VESICLE_A_1 ; PS00669 GAS_VESICLE_A_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVEKTNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARIVIASVETYLKYAEA
CCCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTQSAAMPA
HCCCCCCCCCC
>Mature Secondary Structure 
AVEKTNSSSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARIVIASVETYLKYAEA
CCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTQSAAMPA
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA