| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is yycG [H]
Identifier: 17229733
GI number: 17229733
Start: 2692248
End: 2693381
Strand: Direct
Name: yycG [H]
Synonym: alr2241
Alternate gene names: 17229733
Gene position: 2692248-2693381 (Clockwise)
Preceding gene: 17229732
Following gene: 17229734
Centisome position: 41.98
GC content: 40.65
Gene sequence:
>1134_bases ATGAATCCTATCCAAATTTTGATAGTTGAAGATGAGCAACTAGTGGCTGATGACCTGAGAGAAACTCTAGAATATTTGGG GTACGGTGTGCCTGCCTTAGTAGCATCTGGAGAAGAAGCTATTCTCATGGCAGGAATCTTGCGACCTGACCTAGTGCTGA TGGACATCAGATTAGAGGGTAAAATCGATGGCATAGAAGCCTCTTTTGCCATCCAGTCTCGCTTTGGTTTACCTGTCGTT TACCTAACTGCTAATGCCGACCGCGCAACACTAGAGCGAGCTAAGGCTTCCCATCCTTTTGGTTATATTTTAAAACCCTT CGATGAAAGAATATTAGCTACCACAATAGAGATTGCCATTTCCCGACATCAAACAGAAGTTGAAGTAAAAGAAGCACTAA TGGCTGCCAAAAATAGTCAGCAAATTGCTGAATCCAAAAACCAGATGAAATCACAACATCTCTACATGGCAGCACATGAG TTTCGTAACCCTTTAACTACAATTAAGCTCAGTGCCGAAATGTTGAATACCTATGGCGAGAAGATGTCAGAGGAAAAAAA ACAAAAACATATCGACCGCATTGAATCTGCCACGGATAGCTTGACGAATCTGCTAGAGAATATACTCACACTTGGTAGAG CCGAAGCTGAAAATTTTGTATTGAACCCCACGCTGATAGAGGTAGTAAGTTTCTGTGAAGAAATAGTCGAGTCTTTACGG TTAACATTGAAAGAACAGTATGAAATTAATTTTGTCACAGATACTAAAAGTTGTATTGCCTGCTTAGATGAACAGCTACT GTGGCATTTACTAAATAACTTACTTTCTAACGCAGTCAAGTACTCACCCAGAGGTAGTACTATTTTGCTGCGGCTGACTT GCGACGAAAGTGATGTATATTTTCAAATTAAAGACCAAGGTGTAGGTATTCCCCCAGAATTTCAAGCTAAACTATTTGAA CCTTTTCAACGTGCTGCCAATGTTGCCACGATTCCTGGCACAGGATTAGGGCTAGCAATTGTTAAGCAATGTGTCGATTT GCATCAGGGTACGATATCTATTGATACTACCTTAGGTCAAGGCACAAGTTTCGTAGTTAAACTACCACTGAAGGTAGATT CAATATCGGCTTAA
Upstream 100 bases:
>100_bases AGAAATCTTAAAAAAGATCAAAGAAATTTATAATTTAAGCAAAAATTTTCAGGATATAAATCTGAATAAGCGATAAATCT AATCAACTAGAAAATTAAAT
Downstream 100 bases:
>100_bases TTTTGATAAAAATAGCGCTTTTCGAGTTGATGAAGTATATCGTCAAAATCGTCAAATTTGCAATCATTTATCCATAGCAA TCTAATTTTAGCCCTGTAAT
Product: two-component hybrid sensor and regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MNPIQILIVEDEQLVADDLRETLEYLGYGVPALVASGEEAILMAGILRPDLVLMDIRLEGKIDGIEASFAIQSRFGLPVV YLTANADRATLERAKASHPFGYILKPFDERILATTIEIAISRHQTEVEVKEALMAAKNSQQIAESKNQMKSQHLYMAAHE FRNPLTTIKLSAEMLNTYGEKMSEEKKQKHIDRIESATDSLTNLLENILTLGRAEAENFVLNPTLIEVVSFCEEIVESLR LTLKEQYEINFVTDTKSCIACLDEQLLWHLLNNLLSNAVKYSPRGSTILLRLTCDESDVYFQIKDQGVGIPPEFQAKLFE PFQRAANVATIPGTGLGLAIVKQCVDLHQGTISIDTTLGQGTSFVVKLPLKVDSISA
Sequences:
>Translated_377_residues MNPIQILIVEDEQLVADDLRETLEYLGYGVPALVASGEEAILMAGILRPDLVLMDIRLEGKIDGIEASFAIQSRFGLPVV YLTANADRATLERAKASHPFGYILKPFDERILATTIEIAISRHQTEVEVKEALMAAKNSQQIAESKNQMKSQHLYMAAHE FRNPLTTIKLSAEMLNTYGEKMSEEKKQKHIDRIESATDSLTNLLENILTLGRAEAENFVLNPTLIEVVSFCEEIVESLR LTLKEQYEINFVTDTKSCIACLDEQLLWHLLNNLLSNAVKYSPRGSTILLRLTCDESDVYFQIKDQGVGIPPEFQAKLFE PFQRAANVATIPGTGLGLAIVKQCVDLHQGTISIDTTLGQGTSFVVKLPLKVDSISA >Mature_377_residues MNPIQILIVEDEQLVADDLRETLEYLGYGVPALVASGEEAILMAGILRPDLVLMDIRLEGKIDGIEASFAIQSRFGLPVV YLTANADRATLERAKASHPFGYILKPFDERILATTIEIAISRHQTEVEVKEALMAAKNSQQIAESKNQMKSQHLYMAAHE FRNPLTTIKLSAEMLNTYGEKMSEEKKQKHIDRIESATDSLTNLLENILTLGRAEAENFVLNPTLIEVVSFCEEIVESLR LTLKEQYEINFVTDTKSCIACLDEQLLWHLLNNLLSNAVKYSPRGSTILLRLTCDESDVYFQIKDQGVGIPPEFQAKLFE PFQRAANVATIPGTGLGLAIVKQCVDLHQGTISIDTTLGQGTSFVVKLPLKVDSISA
Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=254, Percent_Identity=30.3149606299213, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786600, Length=248, Percent_Identity=29.8387096774194, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1786912, Length=240, Percent_Identity=28.75, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082128, Length=225, Percent_Identity=30.2222222222222, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1786783, Length=225, Percent_Identity=30.6666666666667, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788713, Length=229, Percent_Identity=27.0742358078603, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788549, Length=273, Percent_Identity=27.8388278388278, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789149, Length=267, Percent_Identity=26.5917602996255, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI87081816, Length=267, Percent_Identity=26.5917602996255, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1790346, Length=260, Percent_Identity=27.6923076923077, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789808, Length=239, Percent_Identity=28.8702928870293, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790861, Length=211, Percent_Identity=28.9099526066351, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI48994928, Length=240, Percent_Identity=25.8333333333333, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1789403, Length=218, Percent_Identity=29.8165137614679, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790551, Length=269, Percent_Identity=27.8810408921933, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788279, Length=212, Percent_Identity=29.7169811320755, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787894, Length=253, Percent_Identity=27.6679841897233, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788393, Length=249, Percent_Identity=25.3012048192771, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=25.3393665158371, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 41865; Mature: 41865
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIQILIVEDEQLVADDLRETLEYLGYGVPALVASGEEAILMAGILRPDLVLMDIRLEG CCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCCEEEEEEEECC KIDGIEASFAIQSRFGLPVVYLTANADRATLERAKASHPFGYILKPFDERILATTIEIAI CCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHH SRHQTEVEVKEALMAAKNSQQIAESKNQMKSQHLYMAAHEFRNPLTTIKLSAEMLNTYGE HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHH KMSEEKKQKHIDRIESATDSLTNLLENILTLGRAEAENFVLNPTLIEVVSFCEEIVESLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHH LTLKEQYEINFVTDTKSCIACLDEQLLWHLLNNLLSNAVKYSPRGSTILLRLTCDESDVY HHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCEE FQIKDQGVGIPPEFQAKLFEPFQRAANVATIPGTGLGLAIVKQCVDLHQGTISIDTTLGQ EEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCC GTSFVVKLPLKVDSISA CCEEEEEECEEECCCCC >Mature Secondary Structure MNPIQILIVEDEQLVADDLRETLEYLGYGVPALVASGEEAILMAGILRPDLVLMDIRLEG CCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCCEEEEEEEECC KIDGIEASFAIQSRFGLPVVYLTANADRATLERAKASHPFGYILKPFDERILATTIEIAI CCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHH SRHQTEVEVKEALMAAKNSQQIAESKNQMKSQHLYMAAHEFRNPLTTIKLSAEMLNTYGE HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHH KMSEEKKQKHIDRIESATDSLTNLLENILTLGRAEAENFVLNPTLIEVVSFCEEIVESLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHH LTLKEQYEINFVTDTKSCIACLDEQLLWHLLNNLLSNAVKYSPRGSTILLRLTCDESDVY HHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCEE FQIKDQGVGIPPEFQAKLFEPFQRAANVATIPGTGLGLAIVKQCVDLHQGTISIDTTLGQ EEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCC GTSFVVKLPLKVDSISA CCEEEEEECEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 9829949; 10878122; 11758928 [H]