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The map label for this gene is phoD [H]

Identifier: 17229726

GI number: 17229726

Start: 2678618

End: 2680210

Strand: Direct

Name: phoD [H]

Synonym: alr2234

Alternate gene names: 17229726

Gene position: 2678618-2680210 (Clockwise)

Preceding gene: 17229725

Following gene: 17229732

Centisome position: 41.76

GC content: 45.39

Gene sequence:

>1593_bases
ATGGTAAATTACCATAATGTTCAGAAGTTCCTGCAAAGTCGTATCAAGCGACGCAACTTAATCATTGGTGCGGGAGCATT
TACTGGTTTAGCTATTGCCAGCCAATTTTCTCCTCAAAGAGCGATCGCTAAAAGCAGATTTCCCGATTATCCCTTTAAAC
TGGGTGTGGCATCAGGCGAACCCTACGACACTAGCGTTGTCATCTGGACTCGTTTAGCTCCCGAACCTTTAAATGGCGGT
GGAATGCCACCTGTGAATGTGCCGATTCGCTGGGAAGTAGCCACCGACTCTAACATGAAGCGCATTATCTCCAGGGGAAC
TGTACTTGCAACTCCTGAACTAGCTCACTCTGTACGAGTAGTAGTAGAAGGACTCTCACCTCATACTTGGTATTGGTATC
GCTTTAACGTTGGTAACGAAGCTAGTCCCATTGGCCGGACTCGCACTGCACCCGCATCCGGTAGTTTCTCCAATCAATTG
AAGTTTGCGTTAGCATCCTGCCAACATTATGAGCAAGGTTATTACACAGCTTATAAGTATATGGCAGAGGATGACCTGGA
TTTGGTTGTCCATGTTGGTGATTACATTTACGAAGGTGGAATCAATCTGACTCGACCAAGACAACACAATAGTTCTGAAA
TTTTCACCTTAGAAGATTATCGCAATCGTCACGCTCTATATAAAACTGATGTCAATTTGCAAGCCACCCATGCAGCTTTC
CCTTGGATTACAACTTGGGATGACCATGAAGTGGAAAACAACTACGCCAACTTGATCTCAGAAATTGATACTGAAGCAGA
CCAAGATCCAGCGATCTTTGCACAACGACGAGCCGTTGCTTATCAGGCTTATTATGAACATATGCCTCTGCGTCCCTTCT
CCCGACCAGTCGGCTCTGATATGCAGCTTTACCGTCGGTTAAACTTTGGCAACTTAGCCACATTCAATGTTTTAGACACT
CGCCAGTATCGCACCGATCAACCCTGTGGCGATGGTACGAGGACAGGTTGTTTAGACGCGCTTAATACTAATGCCACTAT
TACGGGTAAAGCTCAAGAAGATTGGCTATTTGACGGACTAGATAAATCTACTGCTAGGTGGAATGTGTTAGCACAGCAAG
TTCCCATTGCTCAGAGAGACTTTACACCGGGAGAGGGACAATCTTTCAGCATGGATAAATGGGATGGATATGTGGCTTCC
CGCGATCGCTTGATGACTTTTATTGCACAGCGTCAACCTTCTAACCCTATATCGCTAGCAGGTGATGTGCATTCTCACTG
GGCAATGGATCTCAAAACCGATTTCAATAACCCAGAATCTGACATATGGGGTAGTGAGTTTGTATGTACTTCCATTAGCT
CCGGTGGTGATGGTGCCGATATTACTCCCACAGTACAAGCATACTTACCGGATAATCCCCACATTAAGTTCTACAACGGG
CAACGGGGATATGTGCGTTGTACCGTCACTCCTACTACTTGGCGATCAGACTATCTGGTAATGTCAAATGTCTTGACTCC
ATCTGGAACAATTAGCAATCGAGCTTCATTTGTAGTTGACAACGGTATTCCTGGAGTACGACAAGTAGTTTAG

Upstream 100 bases:

>100_bases
GACGCGCTGAATTTAACATTATCAATTGGTATGACAAGTAACGTATTTTTTGTGTTAGCTGTCGCAATGCTACAAACTAT
TTGTTAGTCAGGAGTAGAGA

Downstream 100 bases:

>100_bases
GTTGACTACTCCCCCAAATTCATTCGGGGAGAGTTTGACCTGTCGATGAACTTGTAGCAATAATAACAGAAGCTGTATGG
TTATATACTGCCTTTCATTC

Product: phosphodiesterase/alkaline phosphatase D

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MVNYHNVQKFLQSRIKRRNLIIGAGAFTGLAIASQFSPQRAIAKSRFPDYPFKLGVASGEPYDTSVVIWTRLAPEPLNGG
GMPPVNVPIRWEVATDSNMKRIISRGTVLATPELAHSVRVVVEGLSPHTWYWYRFNVGNEASPIGRTRTAPASGSFSNQL
KFALASCQHYEQGYYTAYKYMAEDDLDLVVHVGDYIYEGGINLTRPRQHNSSEIFTLEDYRNRHALYKTDVNLQATHAAF
PWITTWDDHEVENNYANLISEIDTEADQDPAIFAQRRAVAYQAYYEHMPLRPFSRPVGSDMQLYRRLNFGNLATFNVLDT
RQYRTDQPCGDGTRTGCLDALNTNATITGKAQEDWLFDGLDKSTARWNVLAQQVPIAQRDFTPGEGQSFSMDKWDGYVAS
RDRLMTFIAQRQPSNPISLAGDVHSHWAMDLKTDFNNPESDIWGSEFVCTSISSGGDGADITPTVQAYLPDNPHIKFYNG
QRGYVRCTVTPTTWRSDYLVMSNVLTPSGTISNRASFVVDNGIPGVRQVV

Sequences:

>Translated_530_residues
MVNYHNVQKFLQSRIKRRNLIIGAGAFTGLAIASQFSPQRAIAKSRFPDYPFKLGVASGEPYDTSVVIWTRLAPEPLNGG
GMPPVNVPIRWEVATDSNMKRIISRGTVLATPELAHSVRVVVEGLSPHTWYWYRFNVGNEASPIGRTRTAPASGSFSNQL
KFALASCQHYEQGYYTAYKYMAEDDLDLVVHVGDYIYEGGINLTRPRQHNSSEIFTLEDYRNRHALYKTDVNLQATHAAF
PWITTWDDHEVENNYANLISEIDTEADQDPAIFAQRRAVAYQAYYEHMPLRPFSRPVGSDMQLYRRLNFGNLATFNVLDT
RQYRTDQPCGDGTRTGCLDALNTNATITGKAQEDWLFDGLDKSTARWNVLAQQVPIAQRDFTPGEGQSFSMDKWDGYVAS
RDRLMTFIAQRQPSNPISLAGDVHSHWAMDLKTDFNNPESDIWGSEFVCTSISSGGDGADITPTVQAYLPDNPHIKFYNG
QRGYVRCTVTPTTWRSDYLVMSNVLTPSGTISNRASFVVDNGIPGVRQVV
>Mature_530_residues
MVNYHNVQKFLQSRIKRRNLIIGAGAFTGLAIASQFSPQRAIAKSRFPDYPFKLGVASGEPYDTSVVIWTRLAPEPLNGG
GMPPVNVPIRWEVATDSNMKRIISRGTVLATPELAHSVRVVVEGLSPHTWYWYRFNVGNEASPIGRTRTAPASGSFSNQL
KFALASCQHYEQGYYTAYKYMAEDDLDLVVHVGDYIYEGGINLTRPRQHNSSEIFTLEDYRNRHALYKTDVNLQATHAAF
PWITTWDDHEVENNYANLISEIDTEADQDPAIFAQRRAVAYQAYYEHMPLRPFSRPVGSDMQLYRRLNFGNLATFNVLDT
RQYRTDQPCGDGTRTGCLDALNTNATITGKAQEDWLFDGLDKSTARWNVLAQQVPIAQRDFTPGEGQSFSMDKWDGYVAS
RDRLMTFIAQRQPSNPISLAGDVHSHWAMDLKTDFNNPESDIWGSEFVCTSISSGGDGADITPTVQAYLPDNPHIKFYNG
QRGYVRCTVTPTTWRSDYLVMSNVLTPSGTISNRASFVVDNGIPGVRQVV

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 59519; Mature: 59519

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNYHNVQKFLQSRIKRRNLIIGAGAFTGLAIASQFSPQRAIAKSRFPDYPFKLGVASGE
CCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCC
PYDTSVVIWTRLAPEPLNGGGMPPVNVPIRWEVATDSNMKRIISRGTVLATPELAHSVRV
CCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEECHHHHHHEEE
VVEGLSPHTWYWYRFNVGNEASPIGRTRTAPASGSFSNQLKFALASCQHYEQGYYTAYKY
EEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
MAEDDLDLVVHVGDYIYEGGINLTRPRQHNSSEIFTLEDYRNRHALYKTDVNLQATHAAF
ECCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEHHCCCCCEEEEECCCEEEECCCC
PWITTWDDHEVENNYANLISEIDTEADQDPAIFAQRRAVAYQAYYEHMPLRPFSRPVGSD
CEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
MQLYRRLNFGNLATFNVLDTRQYRTDQPCGDGTRTGCLDALNTNATITGKAQEDWLFDGL
HHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCEECCC
DKSTARWNVLAQQVPIAQRDFTPGEGQSFSMDKWDGYVASRDRLMTFIAQRQPSNPISLA
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
GDVHSHWAMDLKTDFNNPESDIWGSEFVCTSISSGGDGADITPTVQAYLPDNPHIKFYNG
CCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEC
QRGYVRCTVTPTTWRSDYLVMSNVLTPSGTISNRASFVVDNGIPGVRQVV
CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHHCC
>Mature Secondary Structure
MVNYHNVQKFLQSRIKRRNLIIGAGAFTGLAIASQFSPQRAIAKSRFPDYPFKLGVASGE
CCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCC
PYDTSVVIWTRLAPEPLNGGGMPPVNVPIRWEVATDSNMKRIISRGTVLATPELAHSVRV
CCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEECHHHHHHEEE
VVEGLSPHTWYWYRFNVGNEASPIGRTRTAPASGSFSNQLKFALASCQHYEQGYYTAYKY
EEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
MAEDDLDLVVHVGDYIYEGGINLTRPRQHNSSEIFTLEDYRNRHALYKTDVNLQATHAAF
ECCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEHHCCCCCEEEEECCCEEEECCCC
PWITTWDDHEVENNYANLISEIDTEADQDPAIFAQRRAVAYQAYYEHMPLRPFSRPVGSD
CEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
MQLYRRLNFGNLATFNVLDTRQYRTDQPCGDGTRTGCLDALNTNATITGKAQEDWLFDGL
HHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCEECCC
DKSTARWNVLAQQVPIAQRDFTPGEGQSFSMDKWDGYVASRDRLMTFIAQRQPSNPISLA
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
GDVHSHWAMDLKTDFNNPESDIWGSEFVCTSISSGGDGADITPTVQAYLPDNPHIKFYNG
CCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEC
QRGYVRCTVTPTTWRSDYLVMSNVLTPSGTISNRASFVVDNGIPGVRQVV
CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]