| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229712
Identifier: 17229712
GI number: 17229712
Start: 2663492
End: 2664052
Strand: Reverse
Name: 17229712
Synonym: all2220
Alternate gene names: NA
Gene position: 2664052-2663492 (Counterclockwise)
Preceding gene: 17229713
Following gene: 17229711
Centisome position: 41.54
GC content: 43.85
Gene sequence:
>561_bases ATGAAACCCACCATCGAAAACATTATCAACCTATTCACCGAAAAAGGTTCTCAATTATACGGCGCGGAAGCTATTAGTCA ACTAGAACACGCCTTACAATGCGCTAGCCTCGCCGAAGCATCAGGCCAAACCCATGAATTGATTACCGCTTGTCTACTTC ATGATTTAGGGCATTTAATCCATGACTTAGGTGATAATCCAGCCAGCCAAGGCATAGATGACCATCATGAACATCGCGCC ATACCTTTACTAAGTCAGATGTTCAGTCCAGCAGTCACAGAACCGATTAGGCTTCATGTCGTCGCCAAACGCTATCTTTG CTCAGTTATTCCCGAATATTGGGAAAACCTCTCAGCCGCATCCAAACGCAGCCTAGAACTGCAAGGAGGCATATTTTCCC CAGAACAAGCAGAGCAATTTATTCAACAACCATACGCCGAAGATGCTGTACAGTTAAGGATTTTTGACGACAAAGCCAAA ATCACAAATCTCCACACACCCGATTTAAATCACTTCACCCAATTTATAACCGCCTCCTTAAATAAGCTGTCACACATCTA A
Upstream 100 bases:
>100_bases ACAATTAAAAATTCAAAATTCAAAATTCAAAATTCAAAAATAAATACCCCAGTCAACCGTCAACCGTCAACTGTCAACTG TCAACTGTCAACCGCCATTT
Downstream 100 bases:
>100_bases CTTGTCATAGGCTGTCAACAGTCATCAGTCAACAGTCAACAGCCATCAGTCATCAGTCATCAGTCAACAGCCATCAGTCA ACCGTCATCAGTCAAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKPTIENIINLFTEKGSQLYGAEAISQLEHALQCASLAEASGQTHELITACLLHDLGHLIHDLGDNPASQGIDDHHEHRA IPLLSQMFSPAVTEPIRLHVVAKRYLCSVIPEYWENLSAASKRSLELQGGIFSPEQAEQFIQQPYAEDAVQLRIFDDKAK ITNLHTPDLNHFTQFITASLNKLSHI
Sequences:
>Translated_186_residues MKPTIENIINLFTEKGSQLYGAEAISQLEHALQCASLAEASGQTHELITACLLHDLGHLIHDLGDNPASQGIDDHHEHRA IPLLSQMFSPAVTEPIRLHVVAKRYLCSVIPEYWENLSAASKRSLELQGGIFSPEQAEQFIQQPYAEDAVQLRIFDDKAK ITNLHTPDLNHFTQFITASLNKLSHI >Mature_186_residues MKPTIENIINLFTEKGSQLYGAEAISQLEHALQCASLAEASGQTHELITACLLHDLGHLIHDLGDNPASQGIDDHHEHRA IPLLSQMFSPAVTEPIRLHVVAKRYLCSVIPEYWENLSAASKRSLELQGGIFSPEQAEQFIQQPYAEDAVQLRIFDDKAK ITNLHTPDLNHFTQFITASLNKLSHI
Specific function: Unknown
COG id: COG4341
COG function: function code R; Predicted HD phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20739; Mature: 20739
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTIENIINLFTEKGSQLYGAEAISQLEHALQCASLAEASGQTHELITACLLHDLGHLI CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HDLGDNPASQGIDDHHEHRAIPLLSQMFSPAVTEPIRLHVVAKRYLCSVIPEYWENLSAA HHHCCCCHHCCCCHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SKRSLELQGGIFSPEQAEQFIQQPYAEDAVQLRIFDDKAKITNLHTPDLNHFTQFITASL HHHCHHHCCCCCCHHHHHHHHHCCHHCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHH NKLSHI HHHCCC >Mature Secondary Structure MKPTIENIINLFTEKGSQLYGAEAISQLEHALQCASLAEASGQTHELITACLLHDLGHLI CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HDLGDNPASQGIDDHHEHRAIPLLSQMFSPAVTEPIRLHVVAKRYLCSVIPEYWENLSAA HHHCCCCHHCCCCHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SKRSLELQGGIFSPEQAEQFIQQPYAEDAVQLRIFDDKAKITNLHTPDLNHFTQFITASL HHHCHHHCCCCCCHHHHHHHHHCCHHCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHH NKLSHI HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA