| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is phnJ [H]
Identifier: 17229711
GI number: 17229711
Start: 2662530
End: 2663396
Strand: Reverse
Name: phnJ [H]
Synonym: all2219
Alternate gene names: 17229711
Gene position: 2663396-2662530 (Counterclockwise)
Preceding gene: 17229712
Following gene: 17229710
Centisome position: 41.53
GC content: 46.02
Gene sequence:
>867_bases ATGAATACTTCTCCCTCATCCCCAGAAACAGGCTTTAACTTCGCCTACTTAGATGAACAAACAAAGCGTTCCATTCGCCG CGCCTTGCTGAAAGCCGTAGCTATTCCAGGACATCAAATTCCTTTTTCTTCCAGAGAAATGCCCATGTCTTACGGCTGGG GTACTGGTGGAATCCAGGTTACGGCTGCTGTAATTGGTCAAACTGATGTCTTGAAAGTAATTGACCAAGGTGCAGACGAC ACCACAAACGCCGTTAATATTCGCCGCTTTTTCCAAAAAGTCTGTGGCGTAAAAACAACAGAAAGTACACAAGCAGCAAC TTTACTTCAGACTCGCCACCGCATACCCGAAACACCACTCAACGACGGGCAGATTTTAGTTTACCAAGTACCAATCCCTG AACCCTTGCGCTGGCTAGAACCCTCATCTGTGGAGACAGGCAAAATGCACGCTCTAGAAGAATACGGGGCTATGTACGTA AAACTTTACGAAGACATCACCACACATGGACACATTGCCACATCCTACGACTACCCGGTCATGGTGCATCACCGTTATTT GATGAGTCCCAGCCCCATCCCTCGCTTTGATAATCCCAAAATGAATATGAGTCCAGCATTGCAATTATTTGGTGCAGGCA GAGAAAAACGCATATATGCAATTCCACCATACACCAAAGTCAAAAGCCTGGATTTTGAAGACCATCCCTTCACTGTAGAA AAATGGGATAAAGCCTGTGAGTTATGCGGTTCTACAGAAAGCTATTTGGATGAAGTGGTGATTGATGACCAAGGCGGGCG AATGTGGATTTGTTCAGATACGGATTTTTGTACTGGGAGGAGAGAAGGGGTGACTGATGACGGTTGA
Upstream 100 bases:
>100_bases TCTAACTTGTCATAGGCTGTCAACAGTCATCAGTCAACAGTCAACAGCCATCAGTCATCAGTCATCAGTCAACAGCCATC AGTCAACCGTCATCAGTCAA
Downstream 100 bases:
>100_bases CTGATGACTGATGACTGATGACTGGTGACGGTTGACGGTTGACTGATGACTGATGACTGATGACTGGTGACGGTTGACTA ATGACCAATGACCAATGACC
Product: phosphonate metabolism protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNTSPSSPETGFNFAYLDEQTKRSIRRALLKAVAIPGHQIPFSSREMPMSYGWGTGGIQVTAAVIGQTDVLKVIDQGADD TTNAVNIRRFFQKVCGVKTTESTQAATLLQTRHRIPETPLNDGQILVYQVPIPEPLRWLEPSSVETGKMHALEEYGAMYV KLYEDITTHGHIATSYDYPVMVHHRYLMSPSPIPRFDNPKMNMSPALQLFGAGREKRIYAIPPYTKVKSLDFEDHPFTVE KWDKACELCGSTESYLDEVVIDDQGGRMWICSDTDFCTGRREGVTDDG
Sequences:
>Translated_288_residues MNTSPSSPETGFNFAYLDEQTKRSIRRALLKAVAIPGHQIPFSSREMPMSYGWGTGGIQVTAAVIGQTDVLKVIDQGADD TTNAVNIRRFFQKVCGVKTTESTQAATLLQTRHRIPETPLNDGQILVYQVPIPEPLRWLEPSSVETGKMHALEEYGAMYV KLYEDITTHGHIATSYDYPVMVHHRYLMSPSPIPRFDNPKMNMSPALQLFGAGREKRIYAIPPYTKVKSLDFEDHPFTVE KWDKACELCGSTESYLDEVVIDDQGGRMWICSDTDFCTGRREGVTDDG >Mature_288_residues MNTSPSSPETGFNFAYLDEQTKRSIRRALLKAVAIPGHQIPFSSREMPMSYGWGTGGIQVTAAVIGQTDVLKVIDQGADD TTNAVNIRRFFQKVCGVKTTESTQAATLLQTRHRIPETPLNDGQILVYQVPIPEPLRWLEPSSVETGKMHALEEYGAMYV KLYEDITTHGHIATSYDYPVMVHHRYLMSPSPIPRFDNPKMNMSPALQLFGAGREKRIYAIPPYTKVKSLDFEDHPFTVE KWDKACELCGSTESYLDEVVIDDQGGRMWICSDTDFCTGRREGVTDDG
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3627
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnJ family [H]
Homologues:
Organism=Escherichia coli, GI1790536, Length=274, Percent_Identity=72.6277372262774, Blast_Score=441, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010306 [H]
Pfam domain/function: PF06007 PhnJ [H]
EC number: NA
Molecular weight: Translated: 32317; Mature: 32317
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSPSSPETGFNFAYLDEQTKRSIRRALLKAVAIPGHQIPFSSREMPMSYGWGTGGIQV CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE TAAVIGQTDVLKVIDQGADDTTNAVNIRRFFQKVCGVKTTESTQAATLLQTRHRIPETPL EEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC NDGQILVYQVPIPEPLRWLEPSSVETGKMHALEEYGAMYVKLYEDITTHGHIATSYDYPV CCCEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHEEEHHHHHHHCCCCEEECCCCCE MVHHRYLMSPSPIPRFDNPKMNMSPALQLFGAGREKRIYAIPPYTKVKSLDFEDHPFTVE EEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCEECCCCCCCCCCHH KWDKACELCGSTESYLDEVVIDDQGGRMWICSDTDFCTGRREGVTDDG HHHHHHHHCCCCHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTSPSSPETGFNFAYLDEQTKRSIRRALLKAVAIPGHQIPFSSREMPMSYGWGTGGIQV CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE TAAVIGQTDVLKVIDQGADDTTNAVNIRRFFQKVCGVKTTESTQAATLLQTRHRIPETPL EEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC NDGQILVYQVPIPEPLRWLEPSSVETGKMHALEEYGAMYVKLYEDITTHGHIATSYDYPV CCCEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHEEEHHHHHHHCCCCEEECCCCCE MVHHRYLMSPSPIPRFDNPKMNMSPALQLFGAGREKRIYAIPPYTKVKSLDFEDHPFTVE EEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCEECCCCCCCCCCHH KWDKACELCGSTESYLDEVVIDDQGGRMWICSDTDFCTGRREGVTDDG HHHHHHHHCCCCHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]