Click here to switch to the map view.

The map label for this gene is 17229662

Identifier: 17229662

GI number: 17229662

Start: 2605759

End: 2608416

Strand: Reverse

Name: 17229662

Synonym: all2170

Alternate gene names: NA

Gene position: 2608416-2605759 (Counterclockwise)

Preceding gene: 17229663

Following gene: 17229659

Centisome position: 40.67

GC content: 45.33

Gene sequence:

>2658_bases
ATGAATAAAACTACTAGGGTCTATTATCCTGATTTTGTTACAGGAAGAATACGGAAGATAAAGGGTAAGCTGGTCAAGTC
CTTACGTTTGGCTTTGTGCTTTCTGTTGGCGTTGATCTGCACGGTGAATTCGCCAGTGTTGGCAAAAGTAGTCACCCCAA
CTCATACCGCACAAGTCACTTCTACCATCTCCCTAGTAGAACAGGGTAAAGCCCTATACGATACAGGCAGGTTTGCCGAA
GCAGTGCAGATATTACAGCAGGTGGCACAAGAATATCTGCAAAAGGGTGAAAATCTCAAATTAGCAGCGACTCTTAGTAA
CTTGTCTTTAGCCTATCAACAAATAGGTGCGTGGCAACAAGCACAGCAGGCGATTACAGACAGCTTAAATTTACTTGAGG
GCAAAGAACAGAACCCCCAAGTATTAGCCCAATCATTAGATATTCAAGGCCGTTTGCAACTGGCGACGGGTAAAGCAGAG
GCAGCTTTAAGCACTTGGCAGCGCACAGCCAAGATATATCAACAAACTAACAATTTTAATGGCGAAGTGCGATCGCAAAT
CAATCAAGCCCAGGCATGGCGGACACAAGGATTTTATCGTCGGGCGGTGAAAGTTTTACTAGAAGTTAGACAAAAATTAC
AATCACAGCCAGACTCCCTGGAAAAAGCTGTAGGATTGCGATCGCTTGGTGATGCCCTGATGGTAGCAGGGAATTTAATG
GACTCCCGCACTACCTTAGAACAGAGTCTAGAAGTTGCCAAACGCTTGGCAATACCTGGGGAGGTTGCAGCTAGTTACTT
TAGTTTGGGCAACAATGCCCGCGCTAAACTGCAAATATCAGAGGCGATCAATTTTTATCAACAAACAATAGCCGCATCCC
CCGCACCTTTAACGAAAATTCAAGCCCAAGTTAACCACCTCAGTTTGTTGCTGGACAACGAAAAATTCACGGAAGTGGCA
GCTTTAATCCCAGCAATTCAAGACCAAATCAACCAATTACCCCCTAGTCGTGCGGCTATCTACGCCGAGATTAACTTTGC
TCAAAGTCTCATGAAACTTACGAGTTCCGAGAACCAAGGGCGGAATAAAAATGTGCCATTAGCACCAAGCACTCAGGATG
TAGCCAAATTATTAGCAACAACTATCCAGCAATCCCGCAGCTTGGATGATAAACGGGCAGAAGCTTATGCAATCTTGAGT
TTGGGGAATTTGTATGAACAAAACCAGCAGTGGTCAGAAGCCAACAGTCTCACCCAACAAGCCTTAATCTTAGCCCAGGC
TAGTAACGCCTCAGACATTATCTATCGCTTGCAGTGGCAATTGGGGCGGTTGTTGTGGGCGCAAAAAGATATATCTGGGG
CGATCGCCGCTTATGATGCAGCAGTAGAAAGCCTAAAATCCCTACGCAGTGACTTAGTAGCCGTCAATCAAGATGTGCAG
TTTAACTTCCGCGACAGTGTAGAACCCATCTATAGGCAATCAGTAGAGTTATTATTGTCATCCCAGCCAGAAAAAGTTAA
CGAAAAAATCCTTGATAAAGCCCGGCAACGGATTGAAGCATTACAATTGGCAGAATTAGATAACTTCTTTCGGGAAGCCT
GTTTACAAGGTGAAACAGTGTTACTCGATCAAGTGGTAGACCAAGATAACCCCACGGCGGCGATTCTCTACCCGATTATT
TTGCGGCGACAAATTCAGGTAATCGTTAAAATTCCCCACAAACCTTTGCAACTTTACAGCACTAATGTTGAGCAAAAAGA
AGTAGACAAAGTTCTGAGCGAACTACGCGAAAATCTGGTTCGTCCCACGGCTAGCAAAGCCGTCAAAACTCAATCACAAC
AGGTTTATGACTGGCTCATCAAACCTATTGAATCAGAACTAGCAGCTAGTGGGGTAAAAACTCTCGTGTTTGTCCCCGAT
GGTTTATTACGAAATTTACCACTAGGCGCACTCTATGATGGACAGCAATACTTAATAGAAAAATATGCGATCGCCTTGAG
TGTAGGTTTGCAACTCCTCGACCCCAAACCACTACAACGAGGAGACCTGAGAGCATTAACTGCTGGACTCACTCAACCCC
CGCCAAATTACCCCAACTTTGCCCCATTACCTGCAATCAAGTCGGAAGTAGATTTAATTGCTAGCGCGGGAGTTTCCATT
ACTAGTTTGTTCGACCAGCAATTTACCCGCGAAGCACTAGAAAAAGAAGTCAATACCGTCTCCTTTAACGTAGTGCATTT
AGCCACCCATGGCCAGTTTAGTTCCCGTGCTGAAAACACTTTTATTTTGGCATCAGATGGGCCAATCAACGTCACCCAAT
TTGATACCTTGCTGCGTGGTCAAGAGCAAATTCGTCCGAGTGCAGTAGAACTATTAGTGTTAAGCGCTTGTCAAACCGCA
GCCGGAGACAATCGCGCTGCTCTTGGTCTAGCAGGAGCCGCAGTCCGCGCCGGCGCACGCAGTACGGTAGCATCTCTGTG
GCAAATTGATGATGAATCAACAGCTTTATTGGTTGGCGACTTCTATCGAGAACTCAAAAACAACAACATCACTAAAGCCG
AAGCCCTCCGCCGCGCCCAACTAAAATTATTACAACATCCCAACTACAGCGCCCCAAGTTATTGGTCTGCCTATGTATTA
ATTGGTAATTGGTTGTAA

Upstream 100 bases:

>100_bases
GGATGGGTGATGGATACCAATGGCAATATTGCTTTAGTTGCTCCAGTTCCTACTGTTAATCATCAACATCCCTGGTTTTC
GTCCACCATCTGCCATATTC

Downstream 100 bases:

>100_bases
TTTTTTCTAAAAAAGATGATTAGTGATTAATAGTCAAGGAAAAGAGAGATTTGCATACTTAATAATCTGGCATCAATGGG
GAGATAACATAATAAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Haemagglutination Activity Domain Protein; Filamentous Haemagglutinin Outer Membrane Protein; Tetratricopeptide Repeat Family; Filamentous Hemagglutinin Family Outer Membrane Protein; Tetratricopeptide TPR_2 Repeat Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Region; Tetratricopeptide Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Hemagglutination Activity Domain-Containing Protein

Number of amino acids: Translated: 885; Mature: 885

Protein sequence:

>885_residues
MNKTTRVYYPDFVTGRIRKIKGKLVKSLRLALCFLLALICTVNSPVLAKVVTPTHTAQVTSTISLVEQGKALYDTGRFAE
AVQILQQVAQEYLQKGENLKLAATLSNLSLAYQQIGAWQQAQQAITDSLNLLEGKEQNPQVLAQSLDIQGRLQLATGKAE
AALSTWQRTAKIYQQTNNFNGEVRSQINQAQAWRTQGFYRRAVKVLLEVRQKLQSQPDSLEKAVGLRSLGDALMVAGNLM
DSRTTLEQSLEVAKRLAIPGEVAASYFSLGNNARAKLQISEAINFYQQTIAASPAPLTKIQAQVNHLSLLLDNEKFTEVA
ALIPAIQDQINQLPPSRAAIYAEINFAQSLMKLTSSENQGRNKNVPLAPSTQDVAKLLATTIQQSRSLDDKRAEAYAILS
LGNLYEQNQQWSEANSLTQQALILAQASNASDIIYRLQWQLGRLLWAQKDISGAIAAYDAAVESLKSLRSDLVAVNQDVQ
FNFRDSVEPIYRQSVELLLSSQPEKVNEKILDKARQRIEALQLAELDNFFREACLQGETVLLDQVVDQDNPTAAILYPII
LRRQIQVIVKIPHKPLQLYSTNVEQKEVDKVLSELRENLVRPTASKAVKTQSQQVYDWLIKPIESELAASGVKTLVFVPD
GLLRNLPLGALYDGQQYLIEKYAIALSVGLQLLDPKPLQRGDLRALTAGLTQPPPNYPNFAPLPAIKSEVDLIASAGVSI
TSLFDQQFTREALEKEVNTVSFNVVHLATHGQFSSRAENTFILASDGPINVTQFDTLLRGQEQIRPSAVELLVLSACQTA
AGDNRAALGLAGAAVRAGARSTVASLWQIDDESTALLVGDFYRELKNNNITKAEALRRAQLKLLQHPNYSAPSYWSAYVL
IGNWL

Sequences:

>Translated_885_residues
MNKTTRVYYPDFVTGRIRKIKGKLVKSLRLALCFLLALICTVNSPVLAKVVTPTHTAQVTSTISLVEQGKALYDTGRFAE
AVQILQQVAQEYLQKGENLKLAATLSNLSLAYQQIGAWQQAQQAITDSLNLLEGKEQNPQVLAQSLDIQGRLQLATGKAE
AALSTWQRTAKIYQQTNNFNGEVRSQINQAQAWRTQGFYRRAVKVLLEVRQKLQSQPDSLEKAVGLRSLGDALMVAGNLM
DSRTTLEQSLEVAKRLAIPGEVAASYFSLGNNARAKLQISEAINFYQQTIAASPAPLTKIQAQVNHLSLLLDNEKFTEVA
ALIPAIQDQINQLPPSRAAIYAEINFAQSLMKLTSSENQGRNKNVPLAPSTQDVAKLLATTIQQSRSLDDKRAEAYAILS
LGNLYEQNQQWSEANSLTQQALILAQASNASDIIYRLQWQLGRLLWAQKDISGAIAAYDAAVESLKSLRSDLVAVNQDVQ
FNFRDSVEPIYRQSVELLLSSQPEKVNEKILDKARQRIEALQLAELDNFFREACLQGETVLLDQVVDQDNPTAAILYPII
LRRQIQVIVKIPHKPLQLYSTNVEQKEVDKVLSELRENLVRPTASKAVKTQSQQVYDWLIKPIESELAASGVKTLVFVPD
GLLRNLPLGALYDGQQYLIEKYAIALSVGLQLLDPKPLQRGDLRALTAGLTQPPPNYPNFAPLPAIKSEVDLIASAGVSI
TSLFDQQFTREALEKEVNTVSFNVVHLATHGQFSSRAENTFILASDGPINVTQFDTLLRGQEQIRPSAVELLVLSACQTA
AGDNRAALGLAGAAVRAGARSTVASLWQIDDESTALLVGDFYRELKNNNITKAEALRRAQLKLLQHPNYSAPSYWSAYVL
IGNWL
>Mature_885_residues
MNKTTRVYYPDFVTGRIRKIKGKLVKSLRLALCFLLALICTVNSPVLAKVVTPTHTAQVTSTISLVEQGKALYDTGRFAE
AVQILQQVAQEYLQKGENLKLAATLSNLSLAYQQIGAWQQAQQAITDSLNLLEGKEQNPQVLAQSLDIQGRLQLATGKAE
AALSTWQRTAKIYQQTNNFNGEVRSQINQAQAWRTQGFYRRAVKVLLEVRQKLQSQPDSLEKAVGLRSLGDALMVAGNLM
DSRTTLEQSLEVAKRLAIPGEVAASYFSLGNNARAKLQISEAINFYQQTIAASPAPLTKIQAQVNHLSLLLDNEKFTEVA
ALIPAIQDQINQLPPSRAAIYAEINFAQSLMKLTSSENQGRNKNVPLAPSTQDVAKLLATTIQQSRSLDDKRAEAYAILS
LGNLYEQNQQWSEANSLTQQALILAQASNASDIIYRLQWQLGRLLWAQKDISGAIAAYDAAVESLKSLRSDLVAVNQDVQ
FNFRDSVEPIYRQSVELLLSSQPEKVNEKILDKARQRIEALQLAELDNFFREACLQGETVLLDQVVDQDNPTAAILYPII
LRRQIQVIVKIPHKPLQLYSTNVEQKEVDKVLSELRENLVRPTASKAVKTQSQQVYDWLIKPIESELAASGVKTLVFVPD
GLLRNLPLGALYDGQQYLIEKYAIALSVGLQLLDPKPLQRGDLRALTAGLTQPPPNYPNFAPLPAIKSEVDLIASAGVSI
TSLFDQQFTREALEKEVNTVSFNVVHLATHGQFSSRAENTFILASDGPINVTQFDTLLRGQEQIRPSAVELLVLSACQTA
AGDNRAALGLAGAAVRAGARSTVASLWQIDDESTALLVGDFYRELKNNNITKAEALRRAQLKLLQHPNYSAPSYWSAYVL
IGNWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97741; Mature: 97741

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTTRVYYPDFVTGRIRKIKGKLVKSLRLALCFLLALICTVNSPVLAKVVTPTHTAQVT
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
STISLVEQGKALYDTGRFAEAVQILQQVAQEYLQKGENLKLAATLSNLSLAYQQIGAWQQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCHHH
AQQAITDSLNLLEGKEQNPQVLAQSLDIQGRLQLATGKAEAALSTWQRTAKIYQQTNNFN
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
GEVRSQINQAQAWRTQGFYRRAVKVLLEVRQKLQSQPDSLEKAVGLRSLGDALMVAGNLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DSRTTLEQSLEVAKRLAIPGEVAASYFSLGNNARAKLQISEAINFYQQTIAASPAPLTKI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHH
QAQVNHLSLLLDNEKFTEVAALIPAIQDQINQLPPSRAAIYAEINFAQSLMKLTSSENQG
HHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHCCCCCC
RNKNVPLAPSTQDVAKLLATTIQQSRSLDDKRAEAYAILSLGNLYEQNQQWSEANSLTQQ
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALILAQASNASDIIYRLQWQLGRLLWAQKDISGAIAAYDAAVESLKSLRSDLVAVNQDVQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
FNFRDSVEPIYRQSVELLLSSQPEKVNEKILDKARQRIEALQLAELDNFFREACLQGETV
ECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLDQVVDQDNPTAAILYPIILRRQIQVIVKIPHKPLQLYSTNVEQKEVDKVLSELRENLV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHC
RPTASKAVKTQSQQVYDWLIKPIESELAASGVKTLVFVPDGLLRNLPLGALYDGQQYLIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCEECCHHHHHH
KYAIALSVGLQLLDPKPLQRGDLRALTAGLTQPPPNYPNFAPLPAIKSEVDLIASAGVSI
HHHHHHHHCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHH
TSLFDQQFTREALEKEVNTVSFNVVHLATHGQFSSRAENTFILASDGPINVTQFDTLLRG
HHHHHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHCC
QEQIRPSAVELLVLSACQTAAGDNRAALGLAGAAVRAGARSTVASLWQIDDESTALLVGD
HHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHH
FYRELKNNNITKAEALRRAQLKLLQHPNYSAPSYWSAYVLIGNWL
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MNKTTRVYYPDFVTGRIRKIKGKLVKSLRLALCFLLALICTVNSPVLAKVVTPTHTAQVT
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
STISLVEQGKALYDTGRFAEAVQILQQVAQEYLQKGENLKLAATLSNLSLAYQQIGAWQQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCHHH
AQQAITDSLNLLEGKEQNPQVLAQSLDIQGRLQLATGKAEAALSTWQRTAKIYQQTNNFN
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
GEVRSQINQAQAWRTQGFYRRAVKVLLEVRQKLQSQPDSLEKAVGLRSLGDALMVAGNLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DSRTTLEQSLEVAKRLAIPGEVAASYFSLGNNARAKLQISEAINFYQQTIAASPAPLTKI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHH
QAQVNHLSLLLDNEKFTEVAALIPAIQDQINQLPPSRAAIYAEINFAQSLMKLTSSENQG
HHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHCCCCCC
RNKNVPLAPSTQDVAKLLATTIQQSRSLDDKRAEAYAILSLGNLYEQNQQWSEANSLTQQ
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALILAQASNASDIIYRLQWQLGRLLWAQKDISGAIAAYDAAVESLKSLRSDLVAVNQDVQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
FNFRDSVEPIYRQSVELLLSSQPEKVNEKILDKARQRIEALQLAELDNFFREACLQGETV
ECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLDQVVDQDNPTAAILYPIILRRQIQVIVKIPHKPLQLYSTNVEQKEVDKVLSELRENLV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHC
RPTASKAVKTQSQQVYDWLIKPIESELAASGVKTLVFVPDGLLRNLPLGALYDGQQYLIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCEECCHHHHHH
KYAIALSVGLQLLDPKPLQRGDLRALTAGLTQPPPNYPNFAPLPAIKSEVDLIASAGVSI
HHHHHHHHCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHH
TSLFDQQFTREALEKEVNTVSFNVVHLATHGQFSSRAENTFILASDGPINVTQFDTLLRG
HHHHHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHCC
QEQIRPSAVELLVLSACQTAAGDNRAALGLAGAAVRAGARSTVASLWQIDDESTALLVGD
HHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHH
FYRELKNNNITKAEALRRAQLKLLQHPNYSAPSYWSAYVLIGNWL
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA