| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is yyaK [H]
Identifier: 17229633
GI number: 17229633
Start: 2569829
End: 2570812
Strand: Direct
Name: yyaK [H]
Synonym: alr2141
Alternate gene names: 17229633
Gene position: 2569829-2570812 (Clockwise)
Preceding gene: 17229632
Following gene: 17229634
Centisome position: 40.07
GC content: 56.1
Gene sequence:
>984_bases ATGAAAATTAAAGCAATCAAAAGACATCAGGGAATCGGAACAGAAGTGAAAGACGCGACTTACGTCGAGGCTGCTGGGTG GGGTAAGTATCGGTGGTGGCGGTATGTTCTGGGGCTGATAATCATCCTCTTTGCCTGGATGGTCGTTGCCAACTTCGCCA GTGCGCTCGTCGCGCTTGCGCTCGGCGGCAAAGAGGGTGTCGCGGCTTTCGGTCGGCTAGATTATGCCGCATTCGGTCGG GTAGGGGGCTTTGTCGTGAGCATGGCAGGTTTTCCGGTGTTCCTCGCAGGAATCCTCATCGCCGTCACCCTCATCCACCA GCGTCATCCCCGAACGCTCATCACGGCGCGGGAGCAGATCAGTTGGACTCGCGTCGGTCACGGCTTTGTAGCTGGGTTTG TGCCGTGGGTGCTGCTAGCCGGACTAGGGCAGTACCTCCTCTACCCCGATAGCTTCTCCTTCAACTCCGACCTCAAGACG TTCGCGCTCTTCGTGCCGATCGCGCTGGTCATCACTGCGATCCAGACGACCACTGAGGAGCTTTTCTTTCGCGGGTACAT CGTGCAGGGCGCAAGCCTGATCTGGTCGAATCGGGTGTTTCTGGCGATCGTCTCGGCTGTGATCTTCACGCTGCCGCACG CCACTAATCCAGAGTCACAGGAGGGCGGCTGGATCGGGATGTTCCTCGGACTCTTCGTCGGCACGGGTCTGCTGTTTGCG ATCGTTTCATTGATCGACGGCACTACCGAGCTTGCGATCGGCGCACATTTCGCTAACAACATCGCGTACTTTCTTTTGTT CAACTGGTCTGGAAGCTTCTTCACTACGCCAGCCCTGTTCAGCGTTAGTGAGTACCATGCAAGATTCTACGACATCACCT CTCTCGTGCTGATTCCCATTTTCCTGGTGATTGTTTTCCGGGTGTTCAAACGCGATGAGGCATCCGAACCCGTTTCCCAA AATCATCTGAAGGGTCGTCGGTAA
Upstream 100 bases:
>100_bases TTGCCTGTTTTGTTGAATTTAAACGCCTCACTGGAATGACCGCAAAACAGGTTGGCTAACTTCCAAGTACTACATATATG TACGAGTACAGGAGACAAAG
Downstream 100 bases:
>100_bases TCTCGTTAATTTAATTACTTACAAGGAACAATCGCCATGTCAACTGATGAGAACAAAGTTATTGCGATTACTGGAGCTAG TAGCGGTATTGGTGAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKIKAIKRHQGIGTEVKDATYVEAAGWGKYRWWRYVLGLIIILFAWMVVANFASALVALALGGKEGVAAFGRLDYAAFGR VGGFVVSMAGFPVFLAGILIAVTLIHQRHPRTLITAREQISWTRVGHGFVAGFVPWVLLAGLGQYLLYPDSFSFNSDLKT FALFVPIALVITAIQTTTEELFFRGYIVQGASLIWSNRVFLAIVSAVIFTLPHATNPESQEGGWIGMFLGLFVGTGLLFA IVSLIDGTTELAIGAHFANNIAYFLLFNWSGSFFTTPALFSVSEYHARFYDITSLVLIPIFLVIVFRVFKRDEASEPVSQ NHLKGRR
Sequences:
>Translated_327_residues MKIKAIKRHQGIGTEVKDATYVEAAGWGKYRWWRYVLGLIIILFAWMVVANFASALVALALGGKEGVAAFGRLDYAAFGR VGGFVVSMAGFPVFLAGILIAVTLIHQRHPRTLITAREQISWTRVGHGFVAGFVPWVLLAGLGQYLLYPDSFSFNSDLKT FALFVPIALVITAIQTTTEELFFRGYIVQGASLIWSNRVFLAIVSAVIFTLPHATNPESQEGGWIGMFLGLFVGTGLLFA IVSLIDGTTELAIGAHFANNIAYFLLFNWSGSFFTTPALFSVSEYHARFYDITSLVLIPIFLVIVFRVFKRDEASEPVSQ NHLKGRR >Mature_327_residues MKIKAIKRHQGIGTEVKDATYVEAAGWGKYRWWRYVLGLIIILFAWMVVANFASALVALALGGKEGVAAFGRLDYAAFGR VGGFVVSMAGFPVFLAGILIAVTLIHQRHPRTLITAREQISWTRVGHGFVAGFVPWVLLAGLGQYLLYPDSFSFNSDLKT FALFVPIALVITAIQTTTEELFFRGYIVQGASLIWSNRVFLAIVSAVIFTLPHATNPESQEGGWIGMFLGLFVGTGLLFA IVSLIDGTTELAIGAHFANNIAYFLLFNWSGSFFTTPALFSVSEYHARFYDITSLVLIPIFLVIVFRVFKRDEASEPVSQ NHLKGRR
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003675 [H]
Pfam domain/function: PF02517 Abi [H]
EC number: NA
Molecular weight: Translated: 36128; Mature: 36128
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKAIKRHQGIGTEVKDATYVEAAGWGKYRWWRYVLGLIIILFAWMVVANFASALVALA CCCCHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGKEGVAAFGRLDYAAFGRVGGFVVSMAGFPVFLAGILIAVTLIHQRHPRTLITAREQI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SWTRVGHGFVAGFVPWVLLAGLGQYLLYPDSFSFNSDLKTFALFVPIALVITAIQTTTEE HHHHHCHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LFFRGYIVQGASLIWSNRVFLAIVSAVIFTLPHATNPESQEGGWIGMFLGLFVGTGLLFA HHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IVSLIDGTTELAIGAHFANNIAYFLLFNWSGSFFTTPALFSVSEYHARFYDITSLVLIPI HHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLVIVFRVFKRDEASEPVSQNHLKGRR HHHHHHHHHHCCCCCCCCHHCCCCCCC >Mature Secondary Structure MKIKAIKRHQGIGTEVKDATYVEAAGWGKYRWWRYVLGLIIILFAWMVVANFASALVALA CCCCHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGKEGVAAFGRLDYAAFGRVGGFVVSMAGFPVFLAGILIAVTLIHQRHPRTLITAREQI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SWTRVGHGFVAGFVPWVLLAGLGQYLLYPDSFSFNSDLKTFALFVPIALVITAIQTTTEE HHHHHCHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LFFRGYIVQGASLIWSNRVFLAIVSAVIFTLPHATNPESQEGGWIGMFLGLFVGTGLLFA HHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IVSLIDGTTELAIGAHFANNIAYFLLFNWSGSFFTTPALFSVSEYHARFYDITSLVLIPI HHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLVIVFRVFKRDEASEPVSQNHLKGRR HHHHHHHHHHCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]