Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17229498

Identifier: 17229498

GI number: 17229498

Start: 2399454

End: 2400602

Strand: Reverse

Name: 17229498

Synonym: all2006

Alternate gene names: NA

Gene position: 2400602-2399454 (Counterclockwise)

Preceding gene: 17229499

Following gene: 17229497

Centisome position: 37.43

GC content: 41.34

Gene sequence:

>1149_bases
ATGGCAAAAACTATTAGTAGTCGTGTAGAGTTAAGTCCGCATCTAACCCTGTCTTCTGACTTAACCTCTAATCAGCGTCA
AAGCGATGAAGTAAAAGTGAATACGAATAGCAGTAGATTGGGAGAATATCCCCAATTGCAACTTTCTGCTACTGGTATGC
AGGTTGTACACGCAACGAATGGACGCATACGGATCAAGGCGACTGATGGTAGTTTTAGCGCCAACGTCAAAACAATAACC
CAACACTTAAAACACTATAAAGGTGTCAGAGAAGTTGCTACCAATGAGCAAACTCTCAGCATGGTAGTCATCTTTGATGA
ACATCAACTGTCACTACCGCAGATGTTGGGTATTTTGCAACAACTTAATATTCAAACAGCGCCAAATTCACCTTTATCAG
ACCCCTTTGCTCCTTGGAAATCTGTTGATTTTTGGAAAGAGCAGACTGTCTCATTTATTCCCTTAATGACAGGTTTGGCA
GTGACAGGAGGTTTAGGTGTTAGTGGTTTAGCGGCAATTCCCATTTATATGATTACGGCAGATGCAACTCGGCTAGTAAT
TGACTATCTAGAACCGCAAATTACGGGATCAGATGCAGTCAAAGAGTCGGCAAAAGCTGTGATCATAACTGAAGAAAGTA
AGCCAGCAACCGCAGGAAACAAAATTACTAAGACAACTATTAAGTCTGCACAAGTAACTTATAGTATCGTCCATGAAATT
CATGGTAGGATTAGGTTCCACATACCTCAAATAGCTAGCGATCGCGCCTATGCAAAGCGTCTAGAAAGGTTATTAAAAAC
TGATCCTTTGGTTAGTAACGTGCGGATAAATTGCGATGCAGCATCTTTGGCGATCGCATATCAAGGTGGCAAAGTAGCTA
CATCTCATTGGGTGAGTCTGATGGAATTAGCCTTGCAGACAACCCTACCTACACAAGCCACAACAAAAATCAATCAGTCC
ACAGATATAGCCATAGAAAAATTGAGTACAAGTTCACCAACGTTGGCAGCAGAAGCAGTTAGTCAGCCAACAGAAACAAA
ATTGTTCTCCAGCGCAGACCAAACCCTAAATATTTCTCATTTCTGGGTTGATATGAAGCCTGCCGCATTATCCTATTCTT
TAAATTTTATAGCTAACTTGCCGTTGTAG

Upstream 100 bases:

>100_bases
ACAAAATAAAAATTCTTTTTAAGAATTAAACCCAACAAGTTTTTTTAATGTATACTTAACCTATTGTTAACCTAGAAAGC
CGGGTGTAGCTATCGAGTAA

Downstream 100 bases:

>100_bases
AACGTTCCCAAGTCAGGAACAATGGAGGAATCAAAATGGATGATTCTACATCCTCATCATCAGATGCTGTCCCGCGACCG
CCGCGCCACAATTGCACACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MAKTISSRVELSPHLTLSSDLTSNQRQSDEVKVNTNSSRLGEYPQLQLSATGMQVVHATNGRIRIKATDGSFSANVKTIT
QHLKHYKGVREVATNEQTLSMVVIFDEHQLSLPQMLGILQQLNIQTAPNSPLSDPFAPWKSVDFWKEQTVSFIPLMTGLA
VTGGLGVSGLAAIPIYMITADATRLVIDYLEPQITGSDAVKESAKAVIITEESKPATAGNKITKTTIKSAQVTYSIVHEI
HGRIRFHIPQIASDRAYAKRLERLLKTDPLVSNVRINCDAASLAIAYQGGKVATSHWVSLMELALQTTLPTQATTKINQS
TDIAIEKLSTSSPTLAAEAVSQPTETKLFSSADQTLNISHFWVDMKPAALSYSLNFIANLPL

Sequences:

>Translated_382_residues
MAKTISSRVELSPHLTLSSDLTSNQRQSDEVKVNTNSSRLGEYPQLQLSATGMQVVHATNGRIRIKATDGSFSANVKTIT
QHLKHYKGVREVATNEQTLSMVVIFDEHQLSLPQMLGILQQLNIQTAPNSPLSDPFAPWKSVDFWKEQTVSFIPLMTGLA
VTGGLGVSGLAAIPIYMITADATRLVIDYLEPQITGSDAVKESAKAVIITEESKPATAGNKITKTTIKSAQVTYSIVHEI
HGRIRFHIPQIASDRAYAKRLERLLKTDPLVSNVRINCDAASLAIAYQGGKVATSHWVSLMELALQTTLPTQATTKINQS
TDIAIEKLSTSSPTLAAEAVSQPTETKLFSSADQTLNISHFWVDMKPAALSYSLNFIANLPL
>Mature_381_residues
AKTISSRVELSPHLTLSSDLTSNQRQSDEVKVNTNSSRLGEYPQLQLSATGMQVVHATNGRIRIKATDGSFSANVKTITQ
HLKHYKGVREVATNEQTLSMVVIFDEHQLSLPQMLGILQQLNIQTAPNSPLSDPFAPWKSVDFWKEQTVSFIPLMTGLAV
TGGLGVSGLAAIPIYMITADATRLVIDYLEPQITGSDAVKESAKAVIITEESKPATAGNKITKTTIKSAQVTYSIVHEIH
GRIRFHIPQIASDRAYAKRLERLLKTDPLVSNVRINCDAASLAIAYQGGKVATSHWVSLMELALQTTLPTQATTKINQST
DIAIEKLSTSSPTLAAEAVSQPTETKLFSSADQTLNISHFWVDMKPAALSYSLNFIANLPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41579; Mature: 41448

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTISSRVELSPHLTLSSDLTSNQRQSDEVKVNTNSSRLGEYPQLQLSATGMQVVHATN
CCCCCCCCEECCCCEEECCCCCCCCCCCCCEEEECCHHHCCCCCEEEEEECCEEEEEECC
GRIRIKATDGSFSANVKTITQHLKHYKGVREVATNEQTLSMVVIFDEHQLSLPQMLGILQ
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHH
QLNIQTAPNSPLSDPFAPWKSVDFWKEQTVSFIPLMTGLAVTGGLGVSGLAAIPIYMITA
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCEEEEEEC
DATRLVIDYLEPQITGSDAVKESAKAVIITEESKPATAGNKITKTTIKSAQVTYSIVHEI
CHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHH
HGRIRFHIPQIASDRAYAKRLERLLKTDPLVSNVRINCDAASLAIAYQGGKVATSHWVSL
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCEEHHHHHHHH
MELALQTTLPTQATTKINQSTDIAIEKLSTSSPTLAAEAVSQPTETKLFSSADQTLNISH
HHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHHCCCCCEEEEEE
FWVDMKPAALSYSLNFIANLPL
EEEECCCCEEEEEEEEEEECCC
>Mature Secondary Structure 
AKTISSRVELSPHLTLSSDLTSNQRQSDEVKVNTNSSRLGEYPQLQLSATGMQVVHATN
CCCCCCCEECCCCEEECCCCCCCCCCCCCEEEECCHHHCCCCCEEEEEECCEEEEEECC
GRIRIKATDGSFSANVKTITQHLKHYKGVREVATNEQTLSMVVIFDEHQLSLPQMLGILQ
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHH
QLNIQTAPNSPLSDPFAPWKSVDFWKEQTVSFIPLMTGLAVTGGLGVSGLAAIPIYMITA
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCEEEEEEC
DATRLVIDYLEPQITGSDAVKESAKAVIITEESKPATAGNKITKTTIKSAQVTYSIVHEI
CHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHH
HGRIRFHIPQIASDRAYAKRLERLLKTDPLVSNVRINCDAASLAIAYQGGKVATSHWVSL
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCEEHHHHHHHH
MELALQTTLPTQATTKINQSTDIAIEKLSTSSPTLAAEAVSQPTETKLFSSADQTLNISH
HHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHHCCCCCEEEEEE
FWVDMKPAALSYSLNFIANLPL
EEEECCCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA