| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229497
Identifier: 17229497
GI number: 17229497
Start: 2398711
End: 2399163
Strand: Reverse
Name: 17229497
Synonym: all2005
Alternate gene names: NA
Gene position: 2399163-2398711 (Counterclockwise)
Preceding gene: 17229498
Following gene: 17229496
Centisome position: 37.41
GC content: 45.47
Gene sequence:
>453_bases ATGTCTGATATAGAGATGCGTGAGCATCTAGCTGATCTAATCCAGGCTGCTGATATGACGGATGATACAGACTTAACGCC TGAATCACCAGTCATAGAACCAGTAACTTCATCTCCTCCCCCTCAGTCTGTCACTCATTCACAACCAACTGAGCCACCGA TAAAAGTAGCTCATAGCGTTGTTCATGCGATCCCTGGACGAGTGCGGTTTCATGTCCCGCAAGTCGCTACAGATCCAGCC TATGTCCAACGCTTAGAAGCTTTACTCCAATCAGACCCAGTAGTGATCAGTGAGCGAATTAATCGGGAGGCTGCTTCTGT TGTAATCACTTACAAACCAGGAAAAGTACAAAGGCCAAAACAGCAATTGCAAAGTATTTTCGCAGTAGCAGTATCACACT TTTCCAGTTTGATTCAATCTGCGGCAACTGCCAAGATATCCAGTCGTGTATAA
Upstream 100 bases:
>100_bases GCAACACTTACAAAGCTTGCTAGCAAAGGAGACTGAGATTACCACGGAGGAAGTTCATCTCACTACAGGGTCTTTAGTAA TTGCTTACCAGTCTGGACTA
Downstream 100 bases:
>100_bases AAGCAAGTCTGCATTCTCTCAAGGTCAGAGGCTAGATGTGCATCTGTCCTCCTCCCCAGTAGTTCCCAGAAAACAAGCTT ACCCAACATATTTTGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSDIEMREHLADLIQAADMTDDTDLTPESPVIEPVTSSPPPQSVTHSQPTEPPIKVAHSVVHAIPGRVRFHVPQVATDPA YVQRLEALLQSDPVVISERINREAASVVITYKPGKVQRPKQQLQSIFAVAVSHFSSLIQSAATAKISSRV
Sequences:
>Translated_150_residues MSDIEMREHLADLIQAADMTDDTDLTPESPVIEPVTSSPPPQSVTHSQPTEPPIKVAHSVVHAIPGRVRFHVPQVATDPA YVQRLEALLQSDPVVISERINREAASVVITYKPGKVQRPKQQLQSIFAVAVSHFSSLIQSAATAKISSRV >Mature_149_residues SDIEMREHLADLIQAADMTDDTDLTPESPVIEPVTSSPPPQSVTHSQPTEPPIKVAHSVVHAIPGRVRFHVPQVATDPAY VQRLEALLQSDPVVISERINREAASVVITYKPGKVQRPKQQLQSIFAVAVSHFSSLIQSAATAKISSRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16332; Mature: 16201
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIEMREHLADLIQAADMTDDTDLTPESPVIEPVTSSPPPQSVTHSQPTEPPIKVAHSV CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH VHAIPGRVRFHVPQVATDPAYVQRLEALLQSDPVVISERINREAASVVITYKPGKVQRPK HHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHCHHHHEEEEEECCCCCCCHH QQLQSIFAVAVSHFSSLIQSAATAKISSRV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDIEMREHLADLIQAADMTDDTDLTPESPVIEPVTSSPPPQSVTHSQPTEPPIKVAHSV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH VHAIPGRVRFHVPQVATDPAYVQRLEALLQSDPVVISERINREAASVVITYKPGKVQRPK HHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHCHHHHEEEEEECCCCCCCHH QQLQSIFAVAVSHFSSLIQSAATAKISSRV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA