Click here to switch to the map view.

The map label for this gene is 17229378

Identifier: 17229378

GI number: 17229378

Start: 2252568

End: 2253362

Strand: Reverse

Name: 17229378

Synonym: all1886

Alternate gene names: NA

Gene position: 2253362-2252568 (Counterclockwise)

Preceding gene: 17229379

Following gene: 17229376

Centisome position: 35.13

GC content: 42.39

Gene sequence:

>795_bases
ATGCAGCTTGCATCTACTGCACTGCCAAGCATTCAAAGTCAAACTGACCGCAATTTTGAATGGCTCGTCATCAATGATGG
GGCTAATCCTGACACCAGAGATATTATCACCAGCATTAGGGTAAATGCTGATTTCCCTATCACTTACATGGAAATGGAAC
ACCCTGACCCTTGCAGTGGCTTTGGCTTGTGCTACGCTCGTAACCTGGGACTAGATGCAGCTAGTGGTGAGATTGTTTCA
TACCTAGACGATGACAACAGTATAGCCCCTGAATTTGTTGCCTCAATGCGGCAGTACTTTAAACAACATTCCAATCTTCG
ATATAGCATAGCAAGACAGCAGCGCCGCCGCGATGTCATCCGTAATGGTAATGTTGTTCGCCAAGGAAAGCCGTTTGTTT
CACCTAGCGATTGCTGCTCCTTACAGCAGCTTTTATGGCAAAAAGAGATATTCGACAGCAATGGTTTCGTCCACCACCAG
AGCAATGCTCCTAGATGGAACCCCCAGTTTCAAGTATTCGCAGACTACGAGTATTTACTGCAATCTGCTTGCATCTGGGG
TGACAGTGGCTTTGGTTTCAATGACAGCATTCTTATTAAATATATCCAGTCTTCTATTGGTATTATTGGTAGTTCTAATT
ATGAGCAATGGGCAACTGAGCTATTGCTAATTATCACTAATCAAGCTAACTATTCCATCCTTCAAGGCAGTATTGTTGAA
CGCTTAGAACAGCTTGTAGATAGTTATAGTACTAAAGCACAAATTTCATTAAGTCCAAAAGCATTTTCTTTATAA

Upstream 100 bases:

>100_bases
TAAATTGCGTATTTTCGCGCTTAGGTTGTCAAACGCAATCAAATGATAGAGGTATGGAGCTTTGAAATTATCAATCATCA
CTGCAACATACAATAGACCT

Downstream 100 bases:

>100_bases
AAAAAGAAAGCAGCTTATCAATAGTATAGGATTTACGCACCCAGATTTTCTGTTGAGACTGGGTGTAAGGGTGTAAGGGT
ATTATGGGGGTGTAAGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQLASTALPSIQSQTDRNFEWLVINDGANPDTRDIITSIRVNADFPITYMEMEHPDPCSGFGLCYARNLGLDAASGEIVS
YLDDDNSIAPEFVASMRQYFKQHSNLRYSIARQQRRRDVIRNGNVVRQGKPFVSPSDCCSLQQLLWQKEIFDSNGFVHHQ
SNAPRWNPQFQVFADYEYLLQSACIWGDSGFGFNDSILIKYIQSSIGIIGSSNYEQWATELLLIITNQANYSILQGSIVE
RLEQLVDSYSTKAQISLSPKAFSL

Sequences:

>Translated_264_residues
MQLASTALPSIQSQTDRNFEWLVINDGANPDTRDIITSIRVNADFPITYMEMEHPDPCSGFGLCYARNLGLDAASGEIVS
YLDDDNSIAPEFVASMRQYFKQHSNLRYSIARQQRRRDVIRNGNVVRQGKPFVSPSDCCSLQQLLWQKEIFDSNGFVHHQ
SNAPRWNPQFQVFADYEYLLQSACIWGDSGFGFNDSILIKYIQSSIGIIGSSNYEQWATELLLIITNQANYSILQGSIVE
RLEQLVDSYSTKAQISLSPKAFSL
>Mature_264_residues
MQLASTALPSIQSQTDRNFEWLVINDGANPDTRDIITSIRVNADFPITYMEMEHPDPCSGFGLCYARNLGLDAASGEIVS
YLDDDNSIAPEFVASMRQYFKQHSNLRYSIARQQRRRDVIRNGNVVRQGKPFVSPSDCCSLQQLLWQKEIFDSNGFVHHQ
SNAPRWNPQFQVFADYEYLLQSACIWGDSGFGFNDSILIKYIQSSIGIIGSSNYEQWATELLLIITNQANYSILQGSIVE
RLEQLVDSYSTKAQISLSPKAFSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29874; Mature: 29874

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLASTALPSIQSQTDRNFEWLVINDGANPDTRDIITSIRVNADFPITYMEMEHPDPCSG
CCCCHHHCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHEEECCCCCEEEEECCCCCCCCC
FGLCYARNLGLDAASGEIVSYLDDDNSIAPEFVASMRQYFKQHSNLRYSIARQQRRRDVI
CCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RNGNVVRQGKPFVSPSDCCSLQQLLWQKEIFDSNGFVHHQSNAPRWNPQFQVFADYEYLL
HCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECHHHHH
QSACIWGDSGFGFNDSILIKYIQSSIGIIGSSNYEQWATELLLIITNQANYSILQGSIVE
HHHHEECCCCCCCCHHHHHHHHHHHHCEEECCCHHHHHHEEEEEEECCCCCHHHHHHHHH
RLEQLVDSYSTKAQISLSPKAFSL
HHHHHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MQLASTALPSIQSQTDRNFEWLVINDGANPDTRDIITSIRVNADFPITYMEMEHPDPCSG
CCCCHHHCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHEEECCCCCEEEEECCCCCCCCC
FGLCYARNLGLDAASGEIVSYLDDDNSIAPEFVASMRQYFKQHSNLRYSIARQQRRRDVI
CCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RNGNVVRQGKPFVSPSDCCSLQQLLWQKEIFDSNGFVHHQSNAPRWNPQFQVFADYEYLL
HCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECHHHHH
QSACIWGDSGFGFNDSILIKYIQSSIGIIGSSNYEQWATELLLIITNQANYSILQGSIVE
HHHHEECCCCCCCCHHHHHHHHHHHHCEEECCCHHHHHHEEEEEEECCCCCHHHHHHHHH
RLEQLVDSYSTKAQISLSPKAFSL
HHHHHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA