Click here to switch to the map view.

The map label for this gene is 17229313

Identifier: 17229313

GI number: 17229313

Start: 2188125

End: 2188706

Strand: Direct

Name: 17229313

Synonym: alr1821

Alternate gene names: NA

Gene position: 2188125-2188706 (Clockwise)

Preceding gene: 17229311

Following gene: 17229314

Centisome position: 34.12

GC content: 38.32

Gene sequence:

>582_bases
ATGATTGCCTCACCTGAACCAGAATACCTCACACCCGAAGAATATCTCCAGTTAGAGGAAACCAGTCCTATCAAACATGA
ATACATCAACGGCTACGCTTATGCAATGGCTGGAGCTACTGATGCTCATGTCACTGTTGCGGGAAATTTGTTTGCACTTC
TCCGTAATCATGTACGTGGTTCTGGTTGTCGTGTTTACATTGCTGATATGAAAGCCAGGATTGAATCTTTAAATAGATAT
TACTATCCTGATGTCATGGTTACTTGCGATCAACGTGATCAGGAAACACCTAATCATAAAAGGTTTCCTTGTTTAATTGT
AGAAGTTTTGTCTAACTCTACTGAAGCTTTTGATCGAGGGGATAAATTTGTAGATTACCAGGAAATCGAAACTCTAAAAG
AATACGTTTTGATTAATACAAAACGTCAGCGAGTTGAATGTTTTAAACGTGGTGATAATGGTTTATGGATTCTGCAAAAT
TATACAGAGCAGGATAAAATGTTTCGCCTTAATAGTATTGGGTTTGAAGGAGCGATCGCCGAGCTTTACGAAGATGTTAC
CTTTGAACAAACTACCGTATAA

Upstream 100 bases:

>100_bases
ATTAGAGTTAAGGGAATAACAGGAAGCCGCATATATGTATTAATAGTGACAAGATGCTTCCCATAATAATCGTGATAACT
AAAAATGTTGGAAATTGCTT

Downstream 100 bases:

>100_bases
ATTACAACATGATATTTAATCAGCAATTTAACCAATATATGAATATTGCTAAAAAGCTTATAAATCAATTCAAACCTAAG
TTGCATTCTTCACTTGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MIASPEPEYLTPEEYLQLEETSPIKHEYINGYAYAMAGATDAHVTVAGNLFALLRNHVRGSGCRVYIADMKARIESLNRY
YYPDVMVTCDQRDQETPNHKRFPCLIVEVLSNSTEAFDRGDKFVDYQEIETLKEYVLINTKRQRVECFKRGDNGLWILQN
YTEQDKMFRLNSIGFEGAIAELYEDVTFEQTTV

Sequences:

>Translated_193_residues
MIASPEPEYLTPEEYLQLEETSPIKHEYINGYAYAMAGATDAHVTVAGNLFALLRNHVRGSGCRVYIADMKARIESLNRY
YYPDVMVTCDQRDQETPNHKRFPCLIVEVLSNSTEAFDRGDKFVDYQEIETLKEYVLINTKRQRVECFKRGDNGLWILQN
YTEQDKMFRLNSIGFEGAIAELYEDVTFEQTTV
>Mature_193_residues
MIASPEPEYLTPEEYLQLEETSPIKHEYINGYAYAMAGATDAHVTVAGNLFALLRNHVRGSGCRVYIADMKARIESLNRY
YYPDVMVTCDQRDQETPNHKRFPCLIVEVLSNSTEAFDRGDKFVDYQEIETLKEYVLINTKRQRVECFKRGDNGLWILQN
YTEQDKMFRLNSIGFEGAIAELYEDVTFEQTTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll1609 and sll0925 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008538
- InterPro:   IPR012296
- InterPro:   IPR011335 [H]

Pfam domain/function: PF05685 DUF820 [H]

EC number: NA

Molecular weight: Translated: 22363; Mature: 22363

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASPEPEYLTPEEYLQLEETSPIKHEYINGYAYAMAGATDAHVTVAGNLFALLRNHVRG
CCCCCCCCCCCHHHHHEECCCCCCHHHHHCCEEEEECCCCCCEEEEHHHHHHHHHHHCCC
SGCRVYIADMKARIESLNRYYYPDVMVTCDQRDQETPNHKRFPCLIVEVLSNSTEAFDRG
CCCEEEEHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHCC
DKFVDYQEIETLKEYVLINTKRQRVECFKRGDNGLWILQNYTEQDKMFRLNSIGFEGAIA
CCCCCHHHHHHHHHHHEECCHHHHHHHHHCCCCCEEEEECCCCCCCEEEHHCCCCCHHHH
ELYEDVTFEQTTV
HHHHHCCCCCCCC
>Mature Secondary Structure
MIASPEPEYLTPEEYLQLEETSPIKHEYINGYAYAMAGATDAHVTVAGNLFALLRNHVRG
CCCCCCCCCCCHHHHHEECCCCCCHHHHHCCEEEEECCCCCCEEEEHHHHHHHHHHHCCC
SGCRVYIADMKARIESLNRYYYPDVMVTCDQRDQETPNHKRFPCLIVEVLSNSTEAFDRG
CCCEEEEHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHCC
DKFVDYQEIETLKEYVLINTKRQRVECFKRGDNGLWILQNYTEQDKMFRLNSIGFEGAIA
CCCCCHHHHHHHHHHHEECCHHHHHHHHHCCCCCEEEEECCCCCCCEEEHHCCCCCHHHH
ELYEDVTFEQTTV
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]