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The map label for this gene is 17229311

Identifier: 17229311

GI number: 17229311

Start: 2183275

End: 2184951

Strand: Direct

Name: 17229311

Synonym: alr1819

Alternate gene names: NA

Gene position: 2183275-2184951 (Clockwise)

Preceding gene: 17229310

Following gene: 17229313

Centisome position: 34.04

GC content: 44.25

Gene sequence:

>1677_bases
ATGTTTAGTTCGGTTCGACGGTCATTAGCCTACACAACTTTGCTGGCTTTGGGGATGACAGCGATAACAGCAAATCCCTT
AATAGTTTCTAAACCAGCTTCAGCACAAACACCTGTTCCTACAGAAACTCCGTCTACTACAAGTTCCAACTTTTCTGATG
TCAGTTCAGATTACTGGGCGCAACCATTTATTCAAGCTTTAGCACAAAGAAATATCATTGCTGGCTTTCCCGATGGTACT
TTTAGACCAAACCAGGCAGTGAGTCGCGCTGAGTTTGCCACATTAATTCAAAAAGCGTTTAATCAACAACCAGTCCGACA
ATTAAGTGCATCTGGATTTACAGATGTACCTGCGAGTTTCTGGGCATCGCAAGCAATTCGGGAAGCTTACGAAACGGGAT
TTCTCTCTGGCTATCCAGGGAATGTGTTTCGCCCCAATCAACAAATTCCTAGAGTACAGGCGATCGTTGCTTTAAGCAGT
GGTTTAAACTTAACTACAACTGATACTGCATCAGGTGTTCTTAGTAATAACTATGCAGATGCTTCGGCAATTCCTGACTA
TGCTGTCAACGGCGTAGCCGCAGCTACACAAAGCAACATAGTTGTTAACTACCCGAATGTGAGAGAACTGAATCCGTCAA
CATCTCTTACCCGTGGAGAAGCAGCAGCATTTTTGTATCAAGCTTTAGTTCGACAAGGACAAGTACAACCTCTACCTAGC
AATGTTGCAGCTGCTAACTACATAGTGGGTGGGTCTGGTACGACAGGAGGTACACAAGGTTCTAATAATATTGTTGCTTT
GGCAGCATCAAGTAACTCTTTTAGTACTTTGACTACTTTATTGAGGACAGCAGGTTTAACAGATATTCTAGAGCAACCAG
GGCCTTACACAGTCTTTGCTCCCACTAATGAAGCATTTGCGGCGTTACCTGCGGGTACTCTAGAACAACTACAACAACCA
CAGAACAGAGAGTTGTTGGTGAGAATTCTCCGCTATCATGTGGTTCCTGGTCAATTAACGGCTAACCAACTCTCTTCTGG
ACAATTGACAACTGCTAGCGATGCGCCAGTCAATGTGAGAGTTGACACAGCCAATAATCAAATTGCCGTTAATGAGGCTA
GAGTTGTTCAAGCAAATATTCAAGCTAGCAATGGCGTTATCCACGCTATTAACGAAGTCCTGATTCCACCTAATCTAACT
GGTCAGCAGCCACAAGAAGGAACCCCTCAAGCACAAAATCCGGGTGCTGTAACTCCAGGTAGAGCTACCCGTGGCGGTTC
TAGTTACATAGGGGTTGCTGGTAACATTGGTTTAGGTGGTGATACAGCTCTCAGCGATAGCAACTTTGCAGTTATTAGTA
AAGTTGGTTTGACGCGCAATCTATCAGTCCGACCATCGGCTGTTTTTGGTAATGATACCGTATTTCTAGTGCCGTTGACT
TTGGATTTCACCCCCCGCGCAGTAGAGCCTGGTGTTGTGCAACCATTCGCCGTATCACCTTATGTTGGCGCTGGTGTAGC
AATCGAAGCTAGTGGCGATACTGATATTGGTTTACTGTTAACTGGTGGTGTTGATATTCCTTTAGGCGAGAGATTTACTG
TAAATGGTGCTGTTAATGCAGCTTTTGTGGATGAAACTGATGTTGGTTTGCTATTAGGTATTGGCTACAATTTCTAA

Upstream 100 bases:

>100_bases
TGTCTCGGCTTCTCATTGAATCAACTATACAAGCAGTTGTTTCCCATAGTCAATTGATGTCTTTGTGTAATTTATTTACT
TAATTTTGGAGGAATTTTTC

Downstream 100 bases:

>100_bases
TTGAATAACAAGGAATAATAGCGAAACCAGAACCCCGATTTCTTCAAGAAGTCGGGGTTCTCAAAGCTTGACAATTTAAA
GCCCATTGCCAATTAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MFSSVRRSLAYTTLLALGMTAITANPLIVSKPASAQTPVPTETPSTTSSNFSDVSSDYWAQPFIQALAQRNIIAGFPDGT
FRPNQAVSRAEFATLIQKAFNQQPVRQLSASGFTDVPASFWASQAIREAYETGFLSGYPGNVFRPNQQIPRVQAIVALSS
GLNLTTTDTASGVLSNNYADASAIPDYAVNGVAAATQSNIVVNYPNVRELNPSTSLTRGEAAAFLYQALVRQGQVQPLPS
NVAAANYIVGGSGTTGGTQGSNNIVALAASSNSFSTLTTLLRTAGLTDILEQPGPYTVFAPTNEAFAALPAGTLEQLQQP
QNRELLVRILRYHVVPGQLTANQLSSGQLTTASDAPVNVRVDTANNQIAVNEARVVQANIQASNGVIHAINEVLIPPNLT
GQQPQEGTPQAQNPGAVTPGRATRGGSSYIGVAGNIGLGGDTALSDSNFAVISKVGLTRNLSVRPSAVFGNDTVFLVPLT
LDFTPRAVEPGVVQPFAVSPYVGAGVAIEASGDTDIGLLLTGGVDIPLGERFTVNGAVNAAFVDETDVGLLLGIGYNF

Sequences:

>Translated_558_residues
MFSSVRRSLAYTTLLALGMTAITANPLIVSKPASAQTPVPTETPSTTSSNFSDVSSDYWAQPFIQALAQRNIIAGFPDGT
FRPNQAVSRAEFATLIQKAFNQQPVRQLSASGFTDVPASFWASQAIREAYETGFLSGYPGNVFRPNQQIPRVQAIVALSS
GLNLTTTDTASGVLSNNYADASAIPDYAVNGVAAATQSNIVVNYPNVRELNPSTSLTRGEAAAFLYQALVRQGQVQPLPS
NVAAANYIVGGSGTTGGTQGSNNIVALAASSNSFSTLTTLLRTAGLTDILEQPGPYTVFAPTNEAFAALPAGTLEQLQQP
QNRELLVRILRYHVVPGQLTANQLSSGQLTTASDAPVNVRVDTANNQIAVNEARVVQANIQASNGVIHAINEVLIPPNLT
GQQPQEGTPQAQNPGAVTPGRATRGGSSYIGVAGNIGLGGDTALSDSNFAVISKVGLTRNLSVRPSAVFGNDTVFLVPLT
LDFTPRAVEPGVVQPFAVSPYVGAGVAIEASGDTDIGLLLTGGVDIPLGERFTVNGAVNAAFVDETDVGLLLGIGYNF
>Mature_558_residues
MFSSVRRSLAYTTLLALGMTAITANPLIVSKPASAQTPVPTETPSTTSSNFSDVSSDYWAQPFIQALAQRNIIAGFPDGT
FRPNQAVSRAEFATLIQKAFNQQPVRQLSASGFTDVPASFWASQAIREAYETGFLSGYPGNVFRPNQQIPRVQAIVALSS
GLNLTTTDTASGVLSNNYADASAIPDYAVNGVAAATQSNIVVNYPNVRELNPSTSLTRGEAAAFLYQALVRQGQVQPLPS
NVAAANYIVGGSGTTGGTQGSNNIVALAASSNSFSTLTTLLRTAGLTDILEQPGPYTVFAPTNEAFAALPAGTLEQLQQP
QNRELLVRILRYHVVPGQLTANQLSSGQLTTASDAPVNVRVDTANNQIAVNEARVVQANIQASNGVIHAINEVLIPPNLT
GQQPQEGTPQAQNPGAVTPGRATRGGSSYIGVAGNIGLGGDTALSDSNFAVISKVGLTRNLSVRPSAVFGNDTVFLVPLT
LDFTPRAVEPGVVQPFAVSPYVGAGVAIEASGDTDIGLLLTGGVDIPLGERFTVNGAVNAAFVDETDVGLLLGIGYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI61743978, Length=157, Percent_Identity=35.031847133758, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI4507467, Length=114, Percent_Identity=40.3508771929825, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI61743980, Length=137, Percent_Identity=32.8467153284672, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI209862911, Length=131, Percent_Identity=32.0610687022901, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI209863034, Length=131, Percent_Identity=32.0610687022901, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI209862907, Length=133, Percent_Identity=31.5789473684211, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI209863011, Length=131, Percent_Identity=32.0610687022901, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574452, Length=124, Percent_Identity=35.4838709677419, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 58092; Mature: 58092

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50213 FAS1 ; PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSSVRRSLAYTTLLALGMTAITANPLIVSKPASAQTPVPTETPSTTSSNFSDVSSDYWA
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHHH
QPFIQALAQRNIIAGFPDGTFRPNQAVSRAEFATLIQKAFNQQPVRQLSASGFTDVPASF
HHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHH
WASQAIREAYETGFLSGYPGNVFRPNQQIPRVQAIVALSSGLNLTTTDTASGVLSNNYAD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEHHCCCEEEECCCCCCHHCCCCCC
ASAIPDYAVNGVAAATQSNIVVNYPNVRELNPSTSLTRGEAAAFLYQALVRQGQVQPLPS
CCCCCCHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
NVAAANYIVGGSGTTGGTQGSNNIVALAASSNSFSTLTTLLRTAGLTDILEQPGPYTVFA
CCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHCCCCEEEEC
PTNEAFAALPAGTLEQLQQPQNRELLVRILRYHVVPGQLTANQLSSGQLTTASDAPVNVR
CCCCCCEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCEEEE
VDTANNQIAVNEARVVQANIQASNGVIHAINEVLIPPNLTGQQPQEGTPQAQNPGAVTPG
EECCCCEEEECCEEEEEEECCCCCCEEEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCCC
RATRGGSSYIGVAGNIGLGGDTALSDSNFAVISKVGLTRNLSVRPSAVFGNDTVFLVPLT
CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCEEEEEEEE
LDFTPRAVEPGVVQPFAVSPYVGAGVAIEASGDTDIGLLLTGGVDIPLGERFTVNGAVNA
ECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCCEEE
AFVDETDVGLLLGIGYNF
EEECCCCCEEEEECCCCC
>Mature Secondary Structure
MFSSVRRSLAYTTLLALGMTAITANPLIVSKPASAQTPVPTETPSTTSSNFSDVSSDYWA
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHHH
QPFIQALAQRNIIAGFPDGTFRPNQAVSRAEFATLIQKAFNQQPVRQLSASGFTDVPASF
HHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHH
WASQAIREAYETGFLSGYPGNVFRPNQQIPRVQAIVALSSGLNLTTTDTASGVLSNNYAD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEHHCCCEEEECCCCCCHHCCCCCC
ASAIPDYAVNGVAAATQSNIVVNYPNVRELNPSTSLTRGEAAAFLYQALVRQGQVQPLPS
CCCCCCHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
NVAAANYIVGGSGTTGGTQGSNNIVALAASSNSFSTLTTLLRTAGLTDILEQPGPYTVFA
CCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHCCCCEEEEC
PTNEAFAALPAGTLEQLQQPQNRELLVRILRYHVVPGQLTANQLSSGQLTTASDAPVNVR
CCCCCCEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCEEEE
VDTANNQIAVNEARVVQANIQASNGVIHAINEVLIPPNLTGQQPQEGTPQAQNPGAVTPG
EECCCCEEEECCEEEEEEECCCCCCEEEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCCC
RATRGGSSYIGVAGNIGLGGDTALSDSNFAVISKVGLTRNLSVRPSAVFGNDTVFLVPLT
CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCEEEEEEEE
LDFTPRAVEPGVVQPFAVSPYVGAGVAIEASGDTDIGLLLTGGVDIPLGERFTVNGAVNA
ECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCCEEE
AFVDETDVGLLLGIGYNF
EEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]