| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229300
Identifier: 17229300
GI number: 17229300
Start: 2173105
End: 2174061
Strand: Direct
Name: 17229300
Synonym: alr1808
Alternate gene names: NA
Gene position: 2173105-2174061 (Clockwise)
Preceding gene: 17229297
Following gene: 17229301
Centisome position: 33.88
GC content: 42.84
Gene sequence:
>957_bases ATGAATATTCAACGTTGGATTGCCCGGCGAGAGTTAAACTGGCAGCGTTTAGATGCTTTATTAAGACAGGTAGAAACAAA AGGGTTAAAGTCTCTCCCAGCTACAGAAATTCGGGAGTTAGCTAGTTTATATCGTTCAGTTGCGGCAGATTTGGCACGCG CTCAGACCCAGCAAGTCGGTAATATCTTGATACATAATTTACAATCCTTGACAACTCGTGGCTATACGCAGATTTACCAA GGTTCGAGAAGGCAAGAATGGCAAGCGGTGGTGGAATTTTACCGATGGGAACTACCCGCAGTGATTCAGCGAACATTTGC GTACACTGCCACAGCTACCGCTTTATTTTTTCTAGGTCTAATAGTTGCGTGGTGGTATGCTTGGCAAGACCCGACATTCA TGTCTTTAATCGTCCCAGAACGCCTAATTTCTCAAGTGCGAGATGAGCATAAATTGTGGATGGGGTCAATTGTGGGGATT GAACCTTTGGCATCTAGTGGGATTATGATTAACAATCTCAAGGTGTCCTTTGGTGCGGTTGCAGGTGGGATGACAGCCGG GGCATTCACAACTTATGTGATGGTATTTAATGGTTTGCTCATTGGTGCTATCGGTACATTGGTAGGGCAGAATAATTTAG CTTATCCTTTTTGGGCATTTGTTTTTCCTCATGGCGCTTTAGAATTACCCGCCATTTTCTTCGCCGGTGGGGCTGGGTTG TTGATAGCAAGAGCTATTTTATTCCCTGGTGAATATCGTCGAGGTGATGCCTTGAAATTTTATGGTTCTCAAGCAGTGCA GTTATTATTTGGGATTGTGCCAATGTTAGTTATAGCCGGGATTATTGAGGGATTTTTCTCTCCTAACCCCAGGATTCCTG ATCCCTTAAAGTATTTATTTGGCACAGGATTGTTTATTATTTTTTTTATGTACTGTAATCGGAAAAAACATCAGTAA
Upstream 100 bases:
>100_bases AACCAAAGTTTCCTGCCATAGATGCGAAATTTCCTTGAAATTACGGGTGTGGATTTGAGGCTATCTTAAAGTACGTTAAT TGCTAATATTCCCAAAATTT
Downstream 100 bases:
>100_bases AAGGGTAGATTTATCAATGGTTTTGGGTGGGTACGGTTATTGCGATCGCTCTTGGTTATGGAACCGAACCTACAGGCGTT TGATCCTGATCTAATCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Chromate Reductase
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MNIQRWIARRELNWQRLDALLRQVETKGLKSLPATEIRELASLYRSVAADLARAQTQQVGNILIHNLQSLTTRGYTQIYQ GSRRQEWQAVVEFYRWELPAVIQRTFAYTATATALFFLGLIVAWWYAWQDPTFMSLIVPERLISQVRDEHKLWMGSIVGI EPLASSGIMINNLKVSFGAVAGGMTAGAFTTYVMVFNGLLIGAIGTLVGQNNLAYPFWAFVFPHGALELPAIFFAGGAGL LIARAILFPGEYRRGDALKFYGSQAVQLLFGIVPMLVIAGIIEGFFSPNPRIPDPLKYLFGTGLFIIFFMYCNRKKHQ
Sequences:
>Translated_318_residues MNIQRWIARRELNWQRLDALLRQVETKGLKSLPATEIRELASLYRSVAADLARAQTQQVGNILIHNLQSLTTRGYTQIYQ GSRRQEWQAVVEFYRWELPAVIQRTFAYTATATALFFLGLIVAWWYAWQDPTFMSLIVPERLISQVRDEHKLWMGSIVGI EPLASSGIMINNLKVSFGAVAGGMTAGAFTTYVMVFNGLLIGAIGTLVGQNNLAYPFWAFVFPHGALELPAIFFAGGAGL LIARAILFPGEYRRGDALKFYGSQAVQLLFGIVPMLVIAGIIEGFFSPNPRIPDPLKYLFGTGLFIIFFMYCNRKKHQ >Mature_318_residues MNIQRWIARRELNWQRLDALLRQVETKGLKSLPATEIRELASLYRSVAADLARAQTQQVGNILIHNLQSLTTRGYTQIYQ GSRRQEWQAVVEFYRWELPAVIQRTFAYTATATALFFLGLIVAWWYAWQDPTFMSLIVPERLISQVRDEHKLWMGSIVGI EPLASSGIMINNLKVSFGAVAGGMTAGAFTTYVMVFNGLLIGAIGTLVGQNNLAYPFWAFVFPHGALELPAIFFAGGAGL LIARAILFPGEYRRGDALKFYGSQAVQLLFGIVPMLVIAGIIEGFFSPNPRIPDPLKYLFGTGLFIIFFMYCNRKKHQ
Specific function: Unknown
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35736; Mature: 35736
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQRWIARRELNWQRLDALLRQVETKGLKSLPATEIRELASLYRSVAADLARAQTQQVG CCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NILIHNLQSLTTRGYTQIYQGSRRQEWQAVVEFYRWELPAVIQRTFAYTATATALFFLGL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IVAWWYAWQDPTFMSLIVPERLISQVRDEHKLWMGSIVGIEPLASSGIMINNLKVSFGAV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEECEEHHHHH AGGMTAGAFTTYVMVFNGLLIGAIGTLVGQNNLAYPFWAFVFPHGALELPAIFFAGGAGL HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHH LIARAILFPGEYRRGDALKFYGSQAVQLLFGIVPMLVIAGIIEGFFSPNPRIPDPLKYLF HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH GTGLFIIFFMYCNRKKHQ HHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNIQRWIARRELNWQRLDALLRQVETKGLKSLPATEIRELASLYRSVAADLARAQTQQVG CCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NILIHNLQSLTTRGYTQIYQGSRRQEWQAVVEFYRWELPAVIQRTFAYTATATALFFLGL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IVAWWYAWQDPTFMSLIVPERLISQVRDEHKLWMGSIVGIEPLASSGIMINNLKVSFGAV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEECEEHHHHH AGGMTAGAFTTYVMVFNGLLIGAIGTLVGQNNLAYPFWAFVFPHGALELPAIFFAGGAGL HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHH LIARAILFPGEYRRGDALKFYGSQAVQLLFGIVPMLVIAGIIEGFFSPNPRIPDPLKYLF HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH GTGLFIIFFMYCNRKKHQ HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA