| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229256
Identifier: 17229256
GI number: 17229256
Start: 2119743
End: 2120393
Strand: Reverse
Name: 17229256
Synonym: all1764
Alternate gene names: NA
Gene position: 2120393-2119743 (Counterclockwise)
Preceding gene: 17229257
Following gene: 17229255
Centisome position: 33.06
GC content: 41.78
Gene sequence:
>651_bases GTGCTGAAATCATCAGAAACTTTACAACAGCACTTAATTATTTTCACGCGCTATCCAGAACCAGGGAAAACAAAAACCAG ATTGATACCTGCTTTGGGTACTATTGGTGCTGCCAAGCTGCAACGGCAAATGACTGAATACGCTTTATTTCAGGTTAAGG AACTGCAAAAGTTAATTAATATATCTTTAGAAATTCGGTTTGCGGGGGGAGACCTGCAACTTATGCAAGATTGGCTTGGC GCTGAATTGGTTTACCATTCTCAAGGTGATGGAGATTTGGGTTCGCGGATGGCGCGATCGCTGTATGATTCCTTTCAAGG TCAGGCAAAGCAAGTTGTAATTATCGGTACCGACTGTCCTGGATTAAATTCTCATATTCTTGCTCAAGCTTTCGAACAAA TTTATACAGTTGACTTAGTACTTGGTCCAGCCATTGATGGTGGTTACTACTTAATTGCTTTACGTCGCTTCATCCCTGAA TTATTTGCCAACATCGACTGGGGGACTTCGCAAGTATTACACCAAACTGTGGATATTGCTCATCAACTCAACCTCTCATC CTATCACTTACCACCATTGGCTGATGTTGATAGACCAGATGATTTACCCATTTGGCAACGAATTTGGGAAACAGAAGTTA AGATGAGGTAG
Upstream 100 bases:
>100_bases TTTTGGGAGCAATGCGTACAGCTAAAGAGCGTAATAGGGCTAATAGCGGCGGTGATTATTGCTATTAAGATATTTTTAGT TAGCTTAAACAAGGTATGCT
Downstream 100 bases:
>100_bases GTCAATTTATCTCATTCACCCTTGTATTATACAATACATAATTATCTTTAGTTACACTCTAGGAAACCGATGCCAATGTA GAGCAGTTTCCAACCCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLINISLEIRFAGGDLQLMQDWLG AELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCPGLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPE LFANIDWGTSQVLHQTVDIAHQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR
Sequences:
>Translated_216_residues MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLINISLEIRFAGGDLQLMQDWLG AELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCPGLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPE LFANIDWGTSQVLHQTVDIAHQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR >Mature_216_residues MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLINISLEIRFAGGDLQLMQDWLG AELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCPGLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPE LFANIDWGTSQVLHQTVDIAHQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24419; Mature: 24419
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLIN CCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ISLEIRFAGGDLQLMQDWLGAELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCP CEEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC GLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPELFANIDWGTSQVLHQTVDIA CCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLIN CCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ISLEIRFAGGDLQLMQDWLGAELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCP CEEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC GLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPELFANIDWGTSQVLHQTVDIA CCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA