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The map label for this gene is yjiA [H]

Identifier: 17229243

GI number: 17229243

Start: 2105011

End: 2105982

Strand: Reverse

Name: yjiA [H]

Synonym: all1751

Alternate gene names: 17229243

Gene position: 2105982-2105011 (Counterclockwise)

Preceding gene: 17229246

Following gene: 17229242

Centisome position: 32.84

GC content: 41.46

Gene sequence:

>972_bases
ATGATGGCCGACGTAATTACAGATTCAGTTCCCGTTACTGTTCTGACTGGCTATTTAGGCGCAGGTAAAACAACCCTACT
CAACCATATCCTCACCTACGAGCATGGCAAAAAAGTTGCTGTCATCGTTAATGAATTTGGGGAAGTAGGCATTGATAACC
AATTAGTTATTGATGCAGATGAAGAAATTTTTGAGATGAACAACGGCTGCATCTGTTGTACCGTTCGTGGGGACTTAATC
CGGATCATTAGCAATTTGATGAAGCGCCGTGATAAGTTTGACCATCTAGTAATTGAAACTACTGGATTAGCTGACCCTGC
ACCAGTGATTCAGACATTCTTTGTAGATGAGGATATGCAAAGTCAACTGTCTTTAGATGCAGTTGTAACGCTGGTAGATG
CCAAGCATATTTGGCAACATTGGGATGCAGACGAAGCCCAAGAACAGATTGCCTTTGCTGATGTGATTTTACTTAATAAA
ACGGATTTAGTTACCCCATCAGAATTAGATGAATTGGAAAAGCGGATTAGGTCGATGAATGCGATCGCCAAAATCTACCG
TACTCGTAATTCTGAGTTAGCAATGGACGCTTTGTTGGGTGTGAAAGCCTTTGATTTAGATCGTGCTTTAGAGATAGATC
CCAATTTTTTAGGTGAAGATGCCCACGAACATGATGATACTGTTTTTTCTGTGGCTTTAGTACAAGAGGGTGAACTCGAC
GGGGAAAAATTAAACGCTTGGATTTCCGAATTGTTGCGTACCCAAGGGACTGATATCTTCCGTATGAAGGGCATATTAAA
TATTGCTGGGGAAGATAATAGATTTGTCTTCCAAGGGGTGCATATGATATTCGATGGTAGACCCGATCGCCTCTGGAAAC
CCAACGAAAAACGCAAAAACGAACTAGTATTCATCGGTCGCAATTTAGATGAAGCCCAACTCAAGCAAGATTTTCTCGCT
TGTTTTGCTTAA

Upstream 100 bases:

>100_bases
TTTAAGCGTCTTATGTGAATAAGATTCGCACAAAAATATAAAAAGACTTATCATAGGTGATAATGATTATCCGTATGGTA
AGATTTGAGGCTTTTATAAT

Downstream 100 bases:

>100_bases
AAGACACTAGAGGGCTAGGGGGCTAGAGGCGAAGGACTAGTTAAAAAGATATTTACTAACCCCTAACCTCCAACCTCTAA
TCTCTCACCTCTCACTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MMADVITDSVPVTVLTGYLGAGKTTLLNHILTYEHGKKVAVIVNEFGEVGIDNQLVIDADEEIFEMNNGCICCTVRGDLI
RIISNLMKRRDKFDHLVIETTGLADPAPVIQTFFVDEDMQSQLSLDAVVTLVDAKHIWQHWDADEAQEQIAFADVILLNK
TDLVTPSELDELEKRIRSMNAIAKIYRTRNSELAMDALLGVKAFDLDRALEIDPNFLGEDAHEHDDTVFSVALVQEGELD
GEKLNAWISELLRTQGTDIFRMKGILNIAGEDNRFVFQGVHMIFDGRPDRLWKPNEKRKNELVFIGRNLDEAQLKQDFLA
CFA

Sequences:

>Translated_323_residues
MMADVITDSVPVTVLTGYLGAGKTTLLNHILTYEHGKKVAVIVNEFGEVGIDNQLVIDADEEIFEMNNGCICCTVRGDLI
RIISNLMKRRDKFDHLVIETTGLADPAPVIQTFFVDEDMQSQLSLDAVVTLVDAKHIWQHWDADEAQEQIAFADVILLNK
TDLVTPSELDELEKRIRSMNAIAKIYRTRNSELAMDALLGVKAFDLDRALEIDPNFLGEDAHEHDDTVFSVALVQEGELD
GEKLNAWISELLRTQGTDIFRMKGILNIAGEDNRFVFQGVHMIFDGRPDRLWKPNEKRKNELVFIGRNLDEAQLKQDFLA
CFA
>Mature_323_residues
MMADVITDSVPVTVLTGYLGAGKTTLLNHILTYEHGKKVAVIVNEFGEVGIDNQLVIDADEEIFEMNNGCICCTVRGDLI
RIISNLMKRRDKFDHLVIETTGLADPAPVIQTFFVDEDMQSQLSLDAVVTLVDAKHIWQHWDADEAQEQIAFADVILLNK
TDLVTPSELDELEKRIRSMNAIAKIYRTRNSELAMDALLGVKAFDLDRALEIDPNFLGEDAHEHDDTVFSVALVQEGELD
GEKLNAWISELLRTQGTDIFRMKGILNIAGEDNRFVFQGVHMIFDGRPDRLWKPNEKRKNELVFIGRNLDEAQLKQDFLA
CFA

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=338, Percent_Identity=38.7573964497041, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI126722884, Length=338, Percent_Identity=38.7573964497041, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI148727351, Length=338, Percent_Identity=38.7573964497041, Blast_Score=231, Evalue=7e-61,
Organism=Homo sapiens, GI146231952, Length=338, Percent_Identity=38.4615384615385, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI223941779, Length=332, Percent_Identity=38.2530120481928, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI223941776, Length=328, Percent_Identity=37.8048780487805, Blast_Score=215, Evalue=4e-56,
Organism=Homo sapiens, GI119120938, Length=325, Percent_Identity=34.7692307692308, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI310124603, Length=227, Percent_Identity=31.7180616740088, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI310124599, Length=195, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI169184311, Length=172, Percent_Identity=30.2325581395349, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI87082430, Length=323, Percent_Identity=39.0092879256966, Blast_Score=198, Evalue=3e-52,
Organism=Escherichia coli, GI1788499, Length=172, Percent_Identity=36.046511627907, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324356, Length=355, Percent_Identity=29.8591549295775, Blast_Score=159, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 36433; Mature: 36433

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMADVITDSVPVTVLTGYLGAGKTTLLNHILTYEHGKKVAVIVNEFGEVGIDNQLVIDAD
CCCCHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECC
EEIFEMNNGCICCTVRGDLIRIISNLMKRRDKFDHLVIETTGLADPAPVIQTFFVDEDMQ
HHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHH
SQLSLDAVVTLVDAKHIWQHWDADEAQEQIAFADVILLNKTDLVTPSELDELEKRIRSMN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHH
AIAKIYRTRNSELAMDALLGVKAFDLDRALEIDPNFLGEDAHEHDDTVFSVALVQEGELD
HHHHHHHCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCC
GEKLNAWISELLRTQGTDIFRMKGILNIAGEDNRFVFQGVHMIFDGRPDRLWKPNEKRKN
HHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
ELVFIGRNLDEAQLKQDFLACFA
CEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMADVITDSVPVTVLTGYLGAGKTTLLNHILTYEHGKKVAVIVNEFGEVGIDNQLVIDAD
CCCCHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECC
EEIFEMNNGCICCTVRGDLIRIISNLMKRRDKFDHLVIETTGLADPAPVIQTFFVDEDMQ
HHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHH
SQLSLDAVVTLVDAKHIWQHWDADEAQEQIAFADVILLNKTDLVTPSELDELEKRIRSMN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHH
AIAKIYRTRNSELAMDALLGVKAFDLDRALEIDPNFLGEDAHEHDDTVFSVALVQEGELD
HHHHHHHCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCC
GEKLNAWISELLRTQGTDIFRMKGILNIAGEDNRFVFQGVHMIFDGRPDRLWKPNEKRKN
HHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
ELVFIGRNLDEAQLKQDFLACFA
CEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]