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The map label for this gene is 17229211

Identifier: 17229211

GI number: 17229211

Start: 2069594

End: 2069911

Strand: Reverse

Name: 17229211

Synonym: all1719

Alternate gene names: NA

Gene position: 2069911-2069594 (Counterclockwise)

Preceding gene: 17229212

Following gene: 17229209

Centisome position: 32.27

GC content: 39.94

Gene sequence:

>318_bases
ATGCGGAAGAAGAAATCAGCAATTCTTGAAGCAGTTCATGAGACAGCAGAAGACCTACACAAAGCTGGGCTAATGAATCA
AACTACATTGCGCGAATTTGAACACCTATGTCTACCTCCTATTGAGCCTCTAGAACCATTACAAATTAAAGAAATACGGG
AATCATCTCAAGTCAGTCAAGCTGTTTTCGCACGTATTTTGAATATAAGTACTTCAACAGTTCAAAAGTGGGAAATAGGA
CAAAAGCGGCCTAGTGGAGCATCTCTTAAGCTACTGCACTTGGTAAAGAATCGTGGGTTAAACAGTGTGCTGTATTAA

Upstream 100 bases:

>100_bases
AGCTCTGAAAATGTTATCCAAGCAATTACTTGCTCATACACCAGAAGAGCTTGAGCAGGCAAAAAATAGTAATGCGTTAA
TAGAGGTGAGGTGATTTGTA

Downstream 100 bases:

>100_bases
AAACCTCAAACTAAGAAAATCCCGTCCCGAATTTCTTACTTTTATTTGTACAGCCGAGACTTATCAATGATTTTGACAGC
CAATGTGGAGTAGCTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Cro/CI Family Transcriptional Regulator-Related Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator-Like Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MRKKKSAILEAVHETAEDLHKAGLMNQTTLREFEHLCLPPIEPLEPLQIKEIRESSQVSQAVFARILNISTSTVQKWEIG
QKRPSGASLKLLHLVKNRGLNSVLY

Sequences:

>Translated_105_residues
MRKKKSAILEAVHETAEDLHKAGLMNQTTLREFEHLCLPPIEPLEPLQIKEIRESSQVSQAVFARILNISTSTVQKWEIG
QKRPSGASLKLLHLVKNRGLNSVLY
>Mature_105_residues
MRKKKSAILEAVHETAEDLHKAGLMNQTTLREFEHLCLPPIEPLEPLQIKEIRESSQVSQAVFARILNISTSTVQKWEIG
QKRPSGASLKLLHLVKNRGLNSVLY

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11883; Mature: 11883

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKKSAILEAVHETAEDLHKAGLMNQTTLREFEHLCLPPIEPLEPLQIKEIRESSQVSQ
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
AVFARILNISTSTVQKWEIGQKRPSGASLKLLHLVKNRGLNSVLY
HHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKKKSAILEAVHETAEDLHKAGLMNQTTLREFEHLCLPPIEPLEPLQIKEIRESSQVSQ
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
AVFARILNISTSTVQKWEIGQKRPSGASLKLLHLVKNRGLNSVLY
HHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA