| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17229116
Identifier: 17229116
GI number: 17229116
Start: 1912358
End: 1912666
Strand: Direct
Name: 17229116
Synonym: alr1624
Alternate gene names: NA
Gene position: 1912358-1912666 (Clockwise)
Preceding gene: 17229115
Following gene: 17229119
Centisome position: 29.82
GC content: 44.34
Gene sequence:
>309_bases ATGAAACGTTTAGCATCTATCGTTATGGCGCTGTTTCTGGGAACTGCGGCTGTTGCTGCTCTCCCTTCTGAGTCTCAAGC TGATCCAGGAAGAGGTTACTTGTATCCAAAACGAGACTCTTCTTACTATTACCGCGAAAGAAGTTACTCATACCCTCAGC GAGATTATCCTTCCCATCACTACAAAAAACCGCATTATCATCATCACCGACACCATCACCCTAATTATTATTGGGGTAAC AGAGATTATGGGAGACGGGGTGTATATGGGAAGTATCAATACCGCTCTCCTTACTACTACTACCGCTAA
Upstream 100 bases:
>100_bases CTTATCAGACTTTTGATTGAAGCTTTATCTACCCTGAGTTAGAAGGCTCCCCTTGAGAAGCTATAGGGATAATTTATGTA GTTTCTATGAGGGCTAGCAC
Downstream 100 bases:
>100_bases ACTATGTTGAGATATCAATCAGTCTGGTGTTGTTGAATTGGTAGTTAATTGAAACTCCCCTGCCTGAGTAATTTTTACTA CAGTCACTTGGAAGAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MKRLASIVMALFLGTAAVAALPSESQADPGRGYLYPKRDSSYYYRERSYSYPQRDYPSHHYKKPHYHHHRHHHPNYYWGN RDYGRRGVYGKYQYRSPYYYYR
Sequences:
>Translated_102_residues MKRLASIVMALFLGTAAVAALPSESQADPGRGYLYPKRDSSYYYRERSYSYPQRDYPSHHYKKPHYHHHRHHHPNYYWGN RDYGRRGVYGKYQYRSPYYYYR >Mature_102_residues MKRLASIVMALFLGTAAVAALPSESQADPGRGYLYPKRDSSYYYRERSYSYPQRDYPSHHYKKPHYHHHRHHHPNYYWGN RDYGRRGVYGKYQYRSPYYYYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12493; Mature: 12493
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLASIVMALFLGTAAVAALPSESQADPGRGYLYPKRDSSYYYRERSYSYPQRDYPSHH CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC YKKPHYHHHRHHHPNYYWGNRDYGRRGVYGKYQYRSPYYYYR CCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCEEECC >Mature Secondary Structure MKRLASIVMALFLGTAAVAALPSESQADPGRGYLYPKRDSSYYYRERSYSYPQRDYPSHH CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC YKKPHYHHHRHHHPNYYWGNRDYGRRGVYGKYQYRSPYYYYR CCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA