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The map label for this gene is 17229068

Identifier: 17229068

GI number: 17229068

Start: 1843958

End: 1845817

Strand: Direct

Name: 17229068

Synonym: alr1576

Alternate gene names: NA

Gene position: 1843958-1845817 (Clockwise)

Preceding gene: 17229067

Following gene: 17229069

Centisome position: 28.75

GC content: 43.6

Gene sequence:

>1860_bases
ATGAGCCTCAGTCAAATGGTAAATGTCGATTGTGACACAGTATCTAAAACCGTTTATGATGCCGTCATAGTCGGAACAGG
GGTAGCTGGAGCCATTGTTGCCAAAGAATTAAGTCAACAGGGTAAGAGGATTTTGATCATTGAAGCTACAGTACACAAGG
ATTTAACTCTTGCAGGCTTTCAAAGTTACGTTGATACCTTCTACAAAGCGGTGGATAAAAATCCTAACTCCCCATATCCC
GCTAACTCCAATGTTCAAAGCCCCACTGATTACAACGACTATTTTATTGAGCAGGGCCCCATGCCTCTTGCTGGTTCCTA
TACAAGGGTTCTGGGTGGGACAACCATGCACTGGGAAGCAAAAACCCCACGGATGTTACCGGAAGATTTCAAGTTATCGA
GTACTTACGGACAAGGTCTTGATTGGCCGATTGACTATCATGATCTTGAGCCGTACTACCGCAAAGCCGAGCATGAAATG
GGCGTTTGTGGAGACGTAGATGAGCAGAGAGCGCTAGGCCTTGAATTTCCCCAAGACTACGTTTTCCCGATGGAAAAGCT
CCCCCCCTCTTACTTGGATCAAAAAGTTATTGAGAAAGTCAATGGCACTAATGTTGAACTTTATGGCAAGACTCACACAT
TAAGCTTCTCTACGTTTCCTCAAGCTCGTAATGGAGTACCCAATCCTAAATATGATCAAGGTAACCTCTTTGTTCCTGAT
GGAGTTACTAGTGTCCATCCTGTTCAATATGGGGAACGTTGCCAAGGAAATGCTAACTGTGTTCCTATCTGTCCAGTTCA
AGCAAAATATGATGCTCGCAGAACTTTAAGTAAAGCCTTTGAAACAGGTAAAGTTCATGTACTTTACCAAGCAGTGGCTT
ATAAAGTGGAATACGATCGCCAAACTGGTCGCATCACTGCCATTCACTATAAGCACTATAAAAAACCCAATTCTAGCGAG
TACACTACAGGAATTGCTAAGGGAACATTATTTGTCTTAGCAACGAATGCAGTTGAAAACGCTAGGCTATTGCTTGGTTC
TGACTTGCCTAACACCAGTAGATTGATAGGGCGGTATTTAATGGATCACCCTTTCACCTTAGCTTGGGCTTTGATGCCTG
AAGTAACTGGTACTATGCGAGGGCCTCTCGTGACATCAGGAATTGGAACATTTCGTAAAGGCGACTTTCGTAAAAAACAA
TCCGCCTTCGCAGTAGATATTCACAATGATGGCTGGGGATGGGCTACCGGATCACCCAAAAGTGAAGTGGAAGATGCCGT
CGATAATAAAAACAAATATGGCCAAGAACTGCGCCAGACATTGATTAGTCGGATTTCACGACAACTACTGTTGGCTTTCA
TGTGTGAATTACTCCCTGAGTACGGTAACCGAGTAACTATCGATCCAAGGCACAAAGATAAACTGGGTAATTATCGTCCC
GTCATTAACTTTAACCTACCCGACTACAGTCGTAGAACCCTTGCTTACACCAGAAAAGTCTCCCGTGTCATCTTCGAGCG
TTTAGGTGCGGAAGACTATACTCACTACGATCCTCAAGACCCCGCCTATTTTGAGTTTGAGGGTGAAGGTTACGTATACA
AAGGTGGAAACCACTTTTCGGGAACTCATATCATGGGAACAACACCATTGAATTCAGTTGTTGATAGTTATCTGCGTTCT
TGGGATCATAAAAATCTTTTCCTGGTCGGCGCAGGAAGTATGCCAACCATTGGTAGTTCCAATACAACATTGACCATTGC
GGCATTGAGTTTTAGAACGGCCGAGCATATGCTGCAAGAATTGAATTCTTATAACTTGCCAGTCAGTAATTTGCAAATAA
GTAATCTGCAAGCTAGCTAG

Upstream 100 bases:

>100_bases
TTTCAATAAAGACATTGCTGAAGCAAAACTCCTCTCATTTCATATCTGGAGATATTGCCAAAGAGATTCGCGTCAAAGAC
CAACTTTTAAGGAATAATCT

Downstream 100 bases:

>100_bases
AGCTTATCATCAATGAAAATTATGCTCTATGACAAAAAGGCTTCAGCACTTTGAATCCAAAAATCCATAAGGGCTGAAAC
TCAGAGATAAATAGGATTCT

Product: dehydrogenase subunit

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase; Gluconate 2-Dehydrogenase; Choline Dehydrogenase; Dehydrogenase Subunit; GMC Oxidoreductase Family Protein; Glucose Dehydrogenase; 2-Keto-Gluconate Dehydrogenase; GMC Family Oxidoreductase; Dehydrogenase Large Subunit Protein; Oxidoreductase GMC Family; GMC Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; GMC Oxidoreductase Family; Gluconate Dehydrogenase; Oxidoreductase-Like Protein; 2-Keto-Gluconate Dehydrogenase Subunit-Like; Dehydrogluconate Dehydrogenase; Glucoside 3-Dehydrogenase; Dehydrogenase; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Solbitol Dehydrogenase Large Subunit; 2-Keto-Gluconate Dehydrogenase Subunit; Gluconate 2-Dehydrogenase Flavoprotein; Quinoprotein Glucose Dehydrogenase; Flavoproteins Oxidoreductases; Dehydrogenase Protein; Glucose Dehydrogenase Alpha Subunit; Oxidoreductase GMC Family Protein; Gluconate Dehydrogenase Subunit; Glucose Dehydrogenase Subunit Alpha; Gluconate 2-Dehydrogenase Alpha Chain

Number of amino acids: Translated: 619; Mature: 618

Protein sequence:

>619_residues
MSLSQMVNVDCDTVSKTVYDAVIVGTGVAGAIVAKELSQQGKRILIIEATVHKDLTLAGFQSYVDTFYKAVDKNPNSPYP
ANSNVQSPTDYNDYFIEQGPMPLAGSYTRVLGGTTMHWEAKTPRMLPEDFKLSSTYGQGLDWPIDYHDLEPYYRKAEHEM
GVCGDVDEQRALGLEFPQDYVFPMEKLPPSYLDQKVIEKVNGTNVELYGKTHTLSFSTFPQARNGVPNPKYDQGNLFVPD
GVTSVHPVQYGERCQGNANCVPICPVQAKYDARRTLSKAFETGKVHVLYQAVAYKVEYDRQTGRITAIHYKHYKKPNSSE
YTTGIAKGTLFVLATNAVENARLLLGSDLPNTSRLIGRYLMDHPFTLAWALMPEVTGTMRGPLVTSGIGTFRKGDFRKKQ
SAFAVDIHNDGWGWATGSPKSEVEDAVDNKNKYGQELRQTLISRISRQLLLAFMCELLPEYGNRVTIDPRHKDKLGNYRP
VINFNLPDYSRRTLAYTRKVSRVIFERLGAEDYTHYDPQDPAYFEFEGEGYVYKGGNHFSGTHIMGTTPLNSVVDSYLRS
WDHKNLFLVGAGSMPTIGSSNTTLTIAALSFRTAEHMLQELNSYNLPVSNLQISNLQAS

Sequences:

>Translated_619_residues
MSLSQMVNVDCDTVSKTVYDAVIVGTGVAGAIVAKELSQQGKRILIIEATVHKDLTLAGFQSYVDTFYKAVDKNPNSPYP
ANSNVQSPTDYNDYFIEQGPMPLAGSYTRVLGGTTMHWEAKTPRMLPEDFKLSSTYGQGLDWPIDYHDLEPYYRKAEHEM
GVCGDVDEQRALGLEFPQDYVFPMEKLPPSYLDQKVIEKVNGTNVELYGKTHTLSFSTFPQARNGVPNPKYDQGNLFVPD
GVTSVHPVQYGERCQGNANCVPICPVQAKYDARRTLSKAFETGKVHVLYQAVAYKVEYDRQTGRITAIHYKHYKKPNSSE
YTTGIAKGTLFVLATNAVENARLLLGSDLPNTSRLIGRYLMDHPFTLAWALMPEVTGTMRGPLVTSGIGTFRKGDFRKKQ
SAFAVDIHNDGWGWATGSPKSEVEDAVDNKNKYGQELRQTLISRISRQLLLAFMCELLPEYGNRVTIDPRHKDKLGNYRP
VINFNLPDYSRRTLAYTRKVSRVIFERLGAEDYTHYDPQDPAYFEFEGEGYVYKGGNHFSGTHIMGTTPLNSVVDSYLRS
WDHKNLFLVGAGSMPTIGSSNTTLTIAALSFRTAEHMLQELNSYNLPVSNLQISNLQAS
>Mature_618_residues
SLSQMVNVDCDTVSKTVYDAVIVGTGVAGAIVAKELSQQGKRILIIEATVHKDLTLAGFQSYVDTFYKAVDKNPNSPYPA
NSNVQSPTDYNDYFIEQGPMPLAGSYTRVLGGTTMHWEAKTPRMLPEDFKLSSTYGQGLDWPIDYHDLEPYYRKAEHEMG
VCGDVDEQRALGLEFPQDYVFPMEKLPPSYLDQKVIEKVNGTNVELYGKTHTLSFSTFPQARNGVPNPKYDQGNLFVPDG
VTSVHPVQYGERCQGNANCVPICPVQAKYDARRTLSKAFETGKVHVLYQAVAYKVEYDRQTGRITAIHYKHYKKPNSSEY
TTGIAKGTLFVLATNAVENARLLLGSDLPNTSRLIGRYLMDHPFTLAWALMPEVTGTMRGPLVTSGIGTFRKGDFRKKQS
AFAVDIHNDGWGWATGSPKSEVEDAVDNKNKYGQELRQTLISRISRQLLLAFMCELLPEYGNRVTIDPRHKDKLGNYRPV
INFNLPDYSRRTLAYTRKVSRVIFERLGAEDYTHYDPQDPAYFEFEGEGYVYKGGNHFSGTHIMGTTPLNSVVDSYLRSW
DHKNLFLVGAGSMPTIGSSNTTLTIAALSFRTAEHMLQELNSYNLPVSNLQISNLQAS

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69296; Mature: 69165

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSQMVNVDCDTVSKTVYDAVIVGTGVAGAIVAKELSQQGKRILIIEATVHKDLTLAGF
CCHHHHCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHH
QSYVDTFYKAVDKNPNSPYPANSNVQSPTDYNDYFIEQGPMPLAGSYTRVLGGTTMHWEA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEEECC
KTPRMLPEDFKLSSTYGQGLDWPIDYHDLEPYYRKAEHEMGVCGDVDEQRALGLEFPQDY
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCHHH
VFPMEKLPPSYLDQKVIEKVNGTNVELYGKTHTLSFSTFPQARNGVPNPKYDQGNLFVPD
CCCHHHCCHHHHHHHHHHHCCCCCEEEEECEEEEEECCCCHHHCCCCCCCCCCCCEECCC
GVTSVHPVQYGERCQGNANCVPICPVQAKYDARRTLSKAFETGKVHVLYQAVAYKVEYDR
CCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEHEEEEECC
QTGRITAIHYKHYKKPNSSEYTTGIAKGTLFVLATNAVENARLLLGSDLPNTSRLIGRYL
CCCCEEEEEEEECCCCCCCCCCHHHCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHH
MDHPFTLAWALMPEVTGTMRGPLVTSGIGTFRKGDFRKKQSAFAVDIHNDGWGWATGSPK
HCCCCCEEHHHHHHHHCCCCCCEEECCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCCH
SEVEDAVDNKNKYGQELRQTLISRISRQLLLAFMCELLPEYGNRVTIDPRHKDKLGNYRP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCCC
VINFNLPDYSRRTLAYTRKVSRVIFERLGAEDYTHYDPQDPAYFEFEGEGYVYKGGNHFS
EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEECCCCCCC
GTHIMGTTPLNSVVDSYLRSWDHKNLFLVGAGSMPTIGSSNTTLTIAALSFRTAEHMLQE
CCEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHH
LNSYNLPVSNLQISNLQAS
HHCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
SLSQMVNVDCDTVSKTVYDAVIVGTGVAGAIVAKELSQQGKRILIIEATVHKDLTLAGF
CHHHHCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHH
QSYVDTFYKAVDKNPNSPYPANSNVQSPTDYNDYFIEQGPMPLAGSYTRVLGGTTMHWEA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEEECC
KTPRMLPEDFKLSSTYGQGLDWPIDYHDLEPYYRKAEHEMGVCGDVDEQRALGLEFPQDY
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCHHH
VFPMEKLPPSYLDQKVIEKVNGTNVELYGKTHTLSFSTFPQARNGVPNPKYDQGNLFVPD
CCCHHHCCHHHHHHHHHHHCCCCCEEEEECEEEEEECCCCHHHCCCCCCCCCCCCEECCC
GVTSVHPVQYGERCQGNANCVPICPVQAKYDARRTLSKAFETGKVHVLYQAVAYKVEYDR
CCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEHEEEEECC
QTGRITAIHYKHYKKPNSSEYTTGIAKGTLFVLATNAVENARLLLGSDLPNTSRLIGRYL
CCCCEEEEEEEECCCCCCCCCCHHHCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHH
MDHPFTLAWALMPEVTGTMRGPLVTSGIGTFRKGDFRKKQSAFAVDIHNDGWGWATGSPK
HCCCCCEEHHHHHHHHCCCCCCEEECCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCCH
SEVEDAVDNKNKYGQELRQTLISRISRQLLLAFMCELLPEYGNRVTIDPRHKDKLGNYRP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCCC
VINFNLPDYSRRTLAYTRKVSRVIFERLGAEDYTHYDPQDPAYFEFEGEGYVYKGGNHFS
EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEECCCCCCC
GTHIMGTTPLNSVVDSYLRSWDHKNLFLVGAGSMPTIGSSNTTLTIAALSFRTAEHMLQE
CCEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHH
LNSYNLPVSNLQISNLQAS
HHCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA