Click here to switch to the map view.

The map label for this gene is 17229054

Identifier: 17229054

GI number: 17229054

Start: 1827611

End: 1828645

Strand: Direct

Name: 17229054

Synonym: alr1562

Alternate gene names: NA

Gene position: 1827611-1828645 (Clockwise)

Preceding gene: 17229053

Following gene: 17229055

Centisome position: 28.5

GC content: 39.32

Gene sequence:

>1035_bases
ATGTCCATTTCAAAACTTTCTTCAGTTCTAGCAACAAGTTATGAGAATTTCCCCAAGGGACGTTTTATCACTTTAGTTAT
TTTAAGAACAACCCATTCTGAAACTATCTTCCGTACAGAAGGTTCAGGTGAACCAATGTGTAGCGAATTTGTCCAAGCTG
GTTTAGAGGGTGAAAATCAAAAAACTATAATTCAACGTTTGGTAATGACTAAGCGTAAACAAGTAGCACCAGAAAGACGC
TATGGACGAGAACATTTAAGAGCGCATGAGCTTTTATACACTAACCCTAAAGATGGCTCTCTTTGTTCTTTGAATACTAA
TGCACCTTGTGAAATGTGTGTAGATTGTTTCCTCTACGGCTTCGCTGCTGGTGGGGGTGGCGCTCAAAAAAGTCGCATTT
GGACTGAGGACGCTTTTAGTATTTTACCTGCTAGTGATGTTGTAGGCGATCGCACCATAAACGCCATCTACGAAACTGGT
ACAATGCGGGATGAAAAAGGTAACGCCTCAACAGCTTTAAATACCAGCGAATACATCAAACCAGGCGTGCATTTTTTGGA
TGTCGTCACCCTAAAAGATGTAACTGCGGATGAACTGCGATATATCATCGGTAATATTCTTTTTACAAGTCGTTACGGTG
CGGTTTCCAGTCGTGTTGGACGCATGGAAAACGAAATATTAGGTGTATTTGGTAGTATTACCGAACTTCCTAGTTCTCTG
GAACTTGTACAAGCTACCTATGATGCACTAGGTAAGCCGTTAGAACACCCTTTGAATATTAATCAATTAATTACAGCCAG
CAAACAAGTAATAGCTAATTGGAAAAATAAGAGAGGGGTTTCTGTGCAGCTATCTGAAGCAGAATTAGCAGATTTACTGA
CTGATGTAGAAACTCATTGGTCAGAATTAGAACGAGATACTTTTCTAAAACGTTTAAGCCAATCTTATGAACCATTCCGT
CAGGTTTCACCTGAAAAAAACAAAGGTAAAGGTAAAGGTAAAGGTAAAAATACACCAGTTGAAGTAGAGAGTTAA

Upstream 100 bases:

>100_bases
TATTCTTCCTTGAGGAAGCACGTAAACAACTTAAAAGTCAATCTGAAGATGATTCTATCGCAACAACTACAACTGTTTAA
ATAATTAGGAGTTTTTCATC

Downstream 100 bases:

>100_bases
TATGTCAACAATTCTTTTTCAGCAGGCAAAACTTGTTGAATTATACTGTCTTGAACCAGTCTTTTTTGCCTCTAGGGAGT
TGTCTGATACCTATTACACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSISKLSSVLATSYENFPKGRFITLVILRTTHSETIFRTEGSGEPMCSEFVQAGLEGENQKTIIQRLVMTKRKQVAPERR
YGREHLRAHELLYTNPKDGSLCSLNTNAPCEMCVDCFLYGFAAGGGGAQKSRIWTEDAFSILPASDVVGDRTINAIYETG
TMRDEKGNASTALNTSEYIKPGVHFLDVVTLKDVTADELRYIIGNILFTSRYGAVSSRVGRMENEILGVFGSITELPSSL
ELVQATYDALGKPLEHPLNINQLITASKQVIANWKNKRGVSVQLSEAELADLLTDVETHWSELERDTFLKRLSQSYEPFR
QVSPEKNKGKGKGKGKNTPVEVES

Sequences:

>Translated_344_residues
MSISKLSSVLATSYENFPKGRFITLVILRTTHSETIFRTEGSGEPMCSEFVQAGLEGENQKTIIQRLVMTKRKQVAPERR
YGREHLRAHELLYTNPKDGSLCSLNTNAPCEMCVDCFLYGFAAGGGGAQKSRIWTEDAFSILPASDVVGDRTINAIYETG
TMRDEKGNASTALNTSEYIKPGVHFLDVVTLKDVTADELRYIIGNILFTSRYGAVSSRVGRMENEILGVFGSITELPSSL
ELVQATYDALGKPLEHPLNINQLITASKQVIANWKNKRGVSVQLSEAELADLLTDVETHWSELERDTFLKRLSQSYEPFR
QVSPEKNKGKGKGKGKNTPVEVES
>Mature_343_residues
SISKLSSVLATSYENFPKGRFITLVILRTTHSETIFRTEGSGEPMCSEFVQAGLEGENQKTIIQRLVMTKRKQVAPERRY
GREHLRAHELLYTNPKDGSLCSLNTNAPCEMCVDCFLYGFAAGGGGAQKSRIWTEDAFSILPASDVVGDRTINAIYETGT
MRDEKGNASTALNTSEYIKPGVHFLDVVTLKDVTADELRYIIGNILFTSRYGAVSSRVGRMENEILGVFGSITELPSSLE
LVQATYDALGKPLEHPLNINQLITASKQVIANWKNKRGVSVQLSEAELADLLTDVETHWSELERDTFLKRLSQSYEPFRQ
VSPEKNKGKGKGKGKNTPVEVES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38135; Mature: 38003

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISKLSSVLATSYENFPKGRFITLVILRTTHSETIFRTEGSGEPMCSEFVQAGLEGENQ
CCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCH
KTIIQRLVMTKRKQVAPERRYGREHLRAHELLYTNPKDGSLCSLNTNAPCEMCVDCFLYG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCHHHHHHHHHHH
FAAGGGGAQKSRIWTEDAFSILPASDVVGDRTINAIYETGTMRDEKGNASTALNTSEYIK
HHCCCCCCCCCCCCHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHC
PGVHFLDVVTLKDVTADELRYIIGNILFTSRYGAVSSRVGRMENEILGVFGSITELPSSL
CCCHHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ELVQATYDALGKPLEHPLNINQLITASKQVIANWKNKRGVSVQLSEAELADLLTDVETHW
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHH
SELERDTFLKRLSQSYEPFRQVSPEKNKGKGKGKGKNTPVEVES
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
SISKLSSVLATSYENFPKGRFITLVILRTTHSETIFRTEGSGEPMCSEFVQAGLEGENQ
CHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCH
KTIIQRLVMTKRKQVAPERRYGREHLRAHELLYTNPKDGSLCSLNTNAPCEMCVDCFLYG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCHHHHHHHHHHH
FAAGGGGAQKSRIWTEDAFSILPASDVVGDRTINAIYETGTMRDEKGNASTALNTSEYIK
HHCCCCCCCCCCCCHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHC
PGVHFLDVVTLKDVTADELRYIIGNILFTSRYGAVSSRVGRMENEILGVFGSITELPSSL
CCCHHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ELVQATYDALGKPLEHPLNINQLITASKQVIANWKNKRGVSVQLSEAELADLLTDVETHW
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHH
SELERDTFLKRLSQSYEPFRQVSPEKNKGKGKGKGKNTPVEVES
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA