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The map label for this gene is ybbK [C]

Identifier: 17228235

GI number: 17228235

Start: 861842

End: 863368

Strand: Direct

Name: ybbK [C]

Synonym: alr0740

Alternate gene names: 17228235

Gene position: 861842-863368 (Clockwise)

Preceding gene: 17228234

Following gene: 17228236

Centisome position: 13.44

GC content: 41.52

Gene sequence:

>1527_bases
ATGTGGAAAACATTTTATATTAAACCTAACGAAATCGGGATTTTATATCATCGGAGTGATTTCAAAAAAATTTTACAGCC
AGGGACTTACATTTATTTTGGTAGGCATTGGCAAGTTAAAACTTATGACCTCAATCAACCTGAAGCTAAGATTGAGAATT
TGGAATTATTGCTGCGAAATCACAGTGCAGAATTACAGGAACATTTACTAATAGTCAGGACAGCATTTAATCAAGCTGCT
TTAGTTAGATGTGGGCAAACTTGGCTTAGTGTTTTACCTAATCAACTGCGGGTGTTTTGGCGCGGTTTTATTGAGGTACA
AGCTCATTTTTTCAATTTGGAAACAAATTTGGAATTACCTGCTGAGTTTGTACAGCAACTACGGGGAATTATTTTGAGTG
GAATTAAGAAGTTCCCCGTTTCTGAGTATGAGCTTGGTTTGCTGTACGTGCAGAACAACTTTGTGCGATCGCTCTCCACA
GGAGAGTACGCTTTCTGGTCGGTTGATCGAGATGTTTCGGTACGGACTATCAGTCGTCTTATCCCTAATCCAGACTTTCC
CTTAGAAGAAATTTTGATTGAGCAACACCCTGATTTTGTGGCTACTTATTGCGAAACGGTACAGTTACAGAGTCAACAAG
TAGCGATCGCTCGTTATCAAGGTAAAGTCATCGCCATCCTACCACCAACCACCCGCAAGCTATTCTGGCAAGGTGTGGAA
GTAGAAGTGATTGACATCAGTACTGATGCTAAATTGCCAACCTCCCTTATTGCTGAATTAGTTTCTGGTTCACGAGAGGT
TGTAGCCTTGAGCCACAATTATTTACACCTTTGCGAAGTTCCACCACAACACATTGGCTTGCTATACATTAATCAAGAAT
TTCAAGCACAACTCCCCTCAGGGAAACACGCCTGGTGGTTGTTTGGACGTTCTTGGCAAACGGAAGTCTTTGACCTACGT
CAACAAACTTTGGAAGTATCCGGGCAAGATATCCTCTCTAAAGATAAAGTACCCTTACGTTTGAACTTAACTGCTGGCTA
CCGCCTTCTTGACCCCTTGAGAGCCAGAAACGGCTTATCAGATATTCTTAATTATTTATATAAAGAATTGCAGTTTGCCT
TACGTGGTGCTGTGGGAGAGAGGAGTTTGGATGCTTTACTGGAGGATAAAGGCACAATTGATAGAAGTATTTTTGAATAT
ATTCGTCAGAAAACTGCTGACTATGGAATTGAGGTAGATTCGGTTGGAGTCAAAGATATTATTCTCCCTGGCGAAATTAA
AACGATTTTGAGCAAAGTAGTGGAAGCCGAAAAAGCTGCCCAAGCTAACGTAGTTCGTCGTCGTGAAGAAACTGCTGCCA
CTCGCAGTATGTTGAATACCGCCAGGGTCATGGAAGATAACCCCGTAGCCTTGCGTTTGAAGGAGTTGGAGGTGCTAGAG
CGAATTGCTGAGAAAATTGAGAAAATCCAAGTAAATGGCAGCTTGGACAGCATCTTGACGGAATTAATTCGGATTAATCC
CAATTAA

Upstream 100 bases:

>100_bases
AAGCGAATTGAGCAAACTATCAATTCAACAGCACAAAATAAACTTCCTAAGTTATAAATGTATTTGTTTCGTCATTTCCC
AGTTATCTATATAAATTTAT

Downstream 100 bases:

>100_bases
AAGCTCTATTTTCGATAATTTACAATCCTACGTAACTAATTATCTAAGATAGATGCAGAGAATTGGCTTCTATGTCATCC
TAGAAAAGGAGAGTTAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MWKTFYIKPNEIGILYHRSDFKKILQPGTYIYFGRHWQVKTYDLNQPEAKIENLELLLRNHSAELQEHLLIVRTAFNQAA
LVRCGQTWLSVLPNQLRVFWRGFIEVQAHFFNLETNLELPAEFVQQLRGIILSGIKKFPVSEYELGLLYVQNNFVRSLST
GEYAFWSVDRDVSVRTISRLIPNPDFPLEEILIEQHPDFVATYCETVQLQSQQVAIARYQGKVIAILPPTTRKLFWQGVE
VEVIDISTDAKLPTSLIAELVSGSREVVALSHNYLHLCEVPPQHIGLLYINQEFQAQLPSGKHAWWLFGRSWQTEVFDLR
QQTLEVSGQDILSKDKVPLRLNLTAGYRLLDPLRARNGLSDILNYLYKELQFALRGAVGERSLDALLEDKGTIDRSIFEY
IRQKTADYGIEVDSVGVKDIILPGEIKTILSKVVEAEKAAQANVVRRREETAATRSMLNTARVMEDNPVALRLKELEVLE
RIAEKIEKIQVNGSLDSILTELIRINPN

Sequences:

>Translated_508_residues
MWKTFYIKPNEIGILYHRSDFKKILQPGTYIYFGRHWQVKTYDLNQPEAKIENLELLLRNHSAELQEHLLIVRTAFNQAA
LVRCGQTWLSVLPNQLRVFWRGFIEVQAHFFNLETNLELPAEFVQQLRGIILSGIKKFPVSEYELGLLYVQNNFVRSLST
GEYAFWSVDRDVSVRTISRLIPNPDFPLEEILIEQHPDFVATYCETVQLQSQQVAIARYQGKVIAILPPTTRKLFWQGVE
VEVIDISTDAKLPTSLIAELVSGSREVVALSHNYLHLCEVPPQHIGLLYINQEFQAQLPSGKHAWWLFGRSWQTEVFDLR
QQTLEVSGQDILSKDKVPLRLNLTAGYRLLDPLRARNGLSDILNYLYKELQFALRGAVGERSLDALLEDKGTIDRSIFEY
IRQKTADYGIEVDSVGVKDIILPGEIKTILSKVVEAEKAAQANVVRRREETAATRSMLNTARVMEDNPVALRLKELEVLE
RIAEKIEKIQVNGSLDSILTELIRINPN
>Mature_508_residues
MWKTFYIKPNEIGILYHRSDFKKILQPGTYIYFGRHWQVKTYDLNQPEAKIENLELLLRNHSAELQEHLLIVRTAFNQAA
LVRCGQTWLSVLPNQLRVFWRGFIEVQAHFFNLETNLELPAEFVQQLRGIILSGIKKFPVSEYELGLLYVQNNFVRSLST
GEYAFWSVDRDVSVRTISRLIPNPDFPLEEILIEQHPDFVATYCETVQLQSQQVAIARYQGKVIAILPPTTRKLFWQGVE
VEVIDISTDAKLPTSLIAELVSGSREVVALSHNYLHLCEVPPQHIGLLYINQEFQAQLPSGKHAWWLFGRSWQTEVFDLR
QQTLEVSGQDILSKDKVPLRLNLTAGYRLLDPLRARNGLSDILNYLYKELQFALRGAVGERSLDALLEDKGTIDRSIFEY
IRQKTADYGIEVDSVGVKDIILPGEIKTILSKVVEAEKAAQANVVRRREETAATRSMLNTARVMEDNPVALRLKELEVLE
RIAEKIEKIQVNGSLDSILTELIRINPN

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI221316744, Length=166, Percent_Identity=27.710843373494, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI21686995, Length=166, Percent_Identity=27.710843373494, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193210507, Length=167, Percent_Identity=32.9341317365269, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17570161, Length=167, Percent_Identity=32.9341317365269, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17569497, Length=166, Percent_Identity=29.5180722891566, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI32566490, Length=168, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71987621, Length=192, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25153583, Length=169, Percent_Identity=30.1775147928994, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71987612, Length=169, Percent_Identity=30.1775147928994, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281361631, Length=171, Percent_Identity=28.6549707602339, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281361633, Length=171, Percent_Identity=28.6549707602339, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45556022, Length=169, Percent_Identity=29.585798816568, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21356845, Length=168, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28573263, Length=185, Percent_Identity=28.1081081081081, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281361635, Length=165, Percent_Identity=28.4848484848485, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24657857, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281365664, Length=176, Percent_Identity=30.1136363636364, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI62484448, Length=176, Percent_Identity=30.1136363636364, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI62484274, Length=172, Percent_Identity=30.2325581395349, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI18860517, Length=173, Percent_Identity=30.0578034682081, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 58264; Mature: 58264

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKTFYIKPNEIGILYHRSDFKKILQPGTYIYFGRHWQVKTYDLNQPEAKIENLELLLRN
CCEEEEECCCCEEEEEECHHHHHHHCCCCEEEEECEEEEEEECCCCCHHHHHHHHHHHHC
HSAELQEHLLIVRTAFNQAALVRCGQTWLSVLPNQLRVFWRGFIEVQAHFFNLETNLELP
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEEEEEECCCCCH
AEFVQQLRGIILSGIKKFPVSEYELGLLYVQNNFVRSLSTGEYAFWSVDRDVSVRTISRL
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHCCCCCEEEEECCCCCHHHHHHHH
IPNPDFPLEEILIEQHPDFVATYCETVQLQSQQVAIARYQGKVIAILPPTTRKLFWQGVE
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCHHHHCCCCE
VEVIDISTDAKLPTSLIAELVSGSREVVALSHNYLHLCEVPPQHIGLLYINQEFQAQLPS
EEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCEEEEECCCHHHEEEEEECCHHHHCCCC
GKHAWWLFGRSWQTEVFDLRQQTLEVSGQDILSKDKVPLRLNLTAGYRLLDPLRARNGLS
CCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCHHHHHHHHCCCHH
DILNYLYKELQFALRGAVGERSLDALLEDKGTIDRSIFEYIRQKTADYGIEVDSVGVKDI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCEE
ILPGEIKTILSKVVEAEKAAQANVVRRREETAATRSMLNTARVMEDNPVALRLKELEVLE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
RIAEKIEKIQVNGSLDSILTELIRINPN
HHHHHHHHEEECCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MWKTFYIKPNEIGILYHRSDFKKILQPGTYIYFGRHWQVKTYDLNQPEAKIENLELLLRN
CCEEEEECCCCEEEEEECHHHHHHHCCCCEEEEECEEEEEEECCCCCHHHHHHHHHHHHC
HSAELQEHLLIVRTAFNQAALVRCGQTWLSVLPNQLRVFWRGFIEVQAHFFNLETNLELP
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEEEEEECCCCCH
AEFVQQLRGIILSGIKKFPVSEYELGLLYVQNNFVRSLSTGEYAFWSVDRDVSVRTISRL
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHCCCCCEEEEECCCCCHHHHHHHH
IPNPDFPLEEILIEQHPDFVATYCETVQLQSQQVAIARYQGKVIAILPPTTRKLFWQGVE
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCHHHHCCCCE
VEVIDISTDAKLPTSLIAELVSGSREVVALSHNYLHLCEVPPQHIGLLYINQEFQAQLPS
EEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCEEEEECCCHHHEEEEEECCHHHHCCCC
GKHAWWLFGRSWQTEVFDLRQQTLEVSGQDILSKDKVPLRLNLTAGYRLLDPLRARNGLS
CCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCHHHHHHHHCCCHH
DILNYLYKELQFALRGAVGERSLDALLEDKGTIDRSIFEYIRQKTADYGIEVDSVGVKDI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCEE
ILPGEIKTILSKVVEAEKAAQANVVRRREETAATRSMLNTARVMEDNPVALRLKELEVLE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
RIAEKIEKIQVNGSLDSILTELIRINPN
HHHHHHHHEEECCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]