| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228164
Identifier: 17228164
GI number: 17228164
Start: 777620
End: 778216
Strand: Direct
Name: 17228164
Synonym: alr0668
Alternate gene names: NA
Gene position: 777620-778216 (Clockwise)
Preceding gene: 17228159
Following gene: 17228165
Centisome position: 12.12
GC content: 40.2
Gene sequence:
>597_bases ATGCAATCCATTAACATTACAAGACTTTCTGTCCTCAAGCCAGAGTATGACAACCTGTGGAATAGCTGTCAGATTAGACC TGAGTGGCTAGAACGTACTAAAAAAGTTGTCTTGAACATTCAAGCGAAACGCGATCGCTATGAAAGCGTAGGCACACAAA CTAACATTCCTTGGTATTTTATCGGCTGTATCCATAACATGGAAGCATCTTTAAACTTTAACAGTCATCTTCATAATGGT GATTCGCTTAAAGCTAGGACTCATCGTGTTCCAAAAGATAGGCCATTAAATCCCCCTAAAAATGGTTGGGATATTGGCTA TTCCTGGGAAGAAAGTGCAGCAGATGCACTGATTATGAAAGATTTCCATAAAGCTCAAGATTGGAGTATTCCTGCTCAGT TATGGCGGCTCGAACTTTACAATGGTTTTGGTTATAGGCTGCATCATCCAGATGTGCTAACGCCTTATCTTTGGAGTGGT ACGCATCACTACACCAAAGGTAAATATGTTGCCGATAATAAGTGGAGTTCTGATGCTATTTCTGAGCAAGTGGGAGCAGC CGCTATCTTAAAACTATTGTTACCTGAAATTAAATAA
Upstream 100 bases:
>100_bases ACAACTGAGAATCGCTATAAAACAACCTCTCAGAAAAATACTGCATAAGCTGATTTTGATAACACCTATGAAATCAGTGA AAAGTTAATCAACTGATACC
Downstream 100 bases:
>100_bases CTATCCTATAGCTTTAGTTTAAATCTTTAAAGATACCAGGACTTTTTGTCCTGGTATTTTTTGATTAACTAGTTACAAGT GCATAAGTCATTTAACAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MQSINITRLSVLKPEYDNLWNSCQIRPEWLERTKKVVLNIQAKRDRYESVGTQTNIPWYFIGCIHNMEASLNFNSHLHNG DSLKARTHRVPKDRPLNPPKNGWDIGYSWEESAADALIMKDFHKAQDWSIPAQLWRLELYNGFGYRLHHPDVLTPYLWSG THHYTKGKYVADNKWSSDAISEQVGAAAILKLLLPEIK
Sequences:
>Translated_198_residues MQSINITRLSVLKPEYDNLWNSCQIRPEWLERTKKVVLNIQAKRDRYESVGTQTNIPWYFIGCIHNMEASLNFNSHLHNG DSLKARTHRVPKDRPLNPPKNGWDIGYSWEESAADALIMKDFHKAQDWSIPAQLWRLELYNGFGYRLHHPDVLTPYLWSG THHYTKGKYVADNKWSSDAISEQVGAAAILKLLLPEIK >Mature_198_residues MQSINITRLSVLKPEYDNLWNSCQIRPEWLERTKKVVLNIQAKRDRYESVGTQTNIPWYFIGCIHNMEASLNFNSHLHNG DSLKARTHRVPKDRPLNPPKNGWDIGYSWEESAADALIMKDFHKAQDWSIPAQLWRLELYNGFGYRLHHPDVLTPYLWSG THHYTKGKYVADNKWSSDAISEQVGAAAILKLLLPEIK
Specific function: Unknown
COG id: COG5526
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22997; Mature: 22997
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSINITRLSVLKPEYDNLWNSCQIRPEWLERTKKVVLNIQAKRDRYESVGTQTNIPWYF CCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHEEEEEEHHHHHHHHCCCCCCCCEEE IGCIHNMEASLNFNSHLHNGDSLKARTHRVPKDRPLNPPKNGWDIGYSWEESAADALIMK EEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DFHKAQDWSIPAQLWRLELYNGFGYRLHHPDVLTPYLWSGTHHYTKGKYVADNKWSSDAI HHHHCCCCCCHHHHHEEHEECCCCEEEECCCCCCCCEECCEEECCCCCEEECCCCCCHHH SEQVGAAAILKLLLPEIK HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQSINITRLSVLKPEYDNLWNSCQIRPEWLERTKKVVLNIQAKRDRYESVGTQTNIPWYF CCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHEEEEEEHHHHHHHHCCCCCCCCEEE IGCIHNMEASLNFNSHLHNGDSLKARTHRVPKDRPLNPPKNGWDIGYSWEESAADALIMK EEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DFHKAQDWSIPAQLWRLELYNGFGYRLHHPDVLTPYLWSGTHHYTKGKYVADNKWSSDAI HHHHCCCCCCHHHHHEEHEECCCCEEEECCCCCCCCEECCEEECCCCCEEECCCCCCHHH SEQVGAAAILKLLLPEIK HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA