| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228096
Identifier: 17228096
GI number: 17228096
Start: 698393
End: 698881
Strand: Direct
Name: 17228096
Synonym: alr0600
Alternate gene names: NA
Gene position: 698393-698881 (Clockwise)
Preceding gene: 17228095
Following gene: 17228103
Centisome position: 10.89
GC content: 40.29
Gene sequence:
>489_bases ATGGCTGATGAGCTAGATAAAGTAAAAATAGAATGCTTCATCTTAAGCAAGTTACATTCTATGAAACTGAATTTTTCTAT GAAAAAGCTCTCAAATTTAGGACGTTGGATAGCTACAACTGTATTTTGTTTATCAGCGATCGCTTTCGTTTGGCAAGGTG CATTTTTCGCCGACACCTCAGCAATGGCTGATAACTCTACATATTTAATCGCAACTTCGGACGCAACCGATAGTCTACGT AACAAATCCAAAGAATTCATCCGCGACACCAAAGATAACGTTAAAGATGCAGCCAGAACAAATGCTAGCCGTGTCGATGA TGCAACCGATAATGGTAGCACAGCCGAGCGCAAAGCTAACAAAGATGCGTCTCGGATTCAGAAAAGAGCAGAAGAAGATG CAGCTCGTACAGAAACAGCAGTAGACAACAATCTAAATGCTGTTGAGCGTACTATCGATAATATCAAAGGTGCTTTCACC AATAATTAG
Upstream 100 bases:
>100_bases CACCTTTTTTATATTGGTATTACGTTCATTCCAGCAATCTATTAAAAGAGCGATTTTATCTAATAACTTACGACGATAAA ACCTCCACCTAGAGAACGAT
Downstream 100 bases:
>100_bases AAAAGAAACATCAAGGGTGCAGATACCCGATTTCTTTAAAATCGGGTATCTTGTTTTTTGAGTTTTTCCCGGAGACTGTT TCCATCAACCATTACCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MADELDKVKIECFILSKLHSMKLNFSMKKLSNLGRWIATTVFCLSAIAFVWQGAFFADTSAMADNSTYLIATSDATDSLR NKSKEFIRDTKDNVKDAARTNASRVDDATDNGSTAERKANKDASRIQKRAEEDAARTETAVDNNLNAVERTIDNIKGAFT NN
Sequences:
>Translated_162_residues MADELDKVKIECFILSKLHSMKLNFSMKKLSNLGRWIATTVFCLSAIAFVWQGAFFADTSAMADNSTYLIATSDATDSLR NKSKEFIRDTKDNVKDAARTNASRVDDATDNGSTAERKANKDASRIQKRAEEDAARTETAVDNNLNAVERTIDNIKGAFT NN >Mature_161_residues ADELDKVKIECFILSKLHSMKLNFSMKKLSNLGRWIATTVFCLSAIAFVWQGAFFADTSAMADNSTYLIATSDATDSLRN KSKEFIRDTKDNVKDAARTNASRVDDATDNGSTAERKANKDASRIQKRAEEDAARTETAVDNNLNAVERTIDNIKGAFTN N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17938; Mature: 17807
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADELDKVKIECFILSKLHSMKLNFSMKKLSNLGRWIATTVFCLSAIAFVWQGAFFADTS CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCH AMADNSTYLIATSDATDSLRNKSKEFIRDTKDNVKDAARTNASRVDDATDNGSTAERKAN HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHC KDASRIQKRAEEDAARTETAVDNNLNAVERTIDNIKGAFTNN CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADELDKVKIECFILSKLHSMKLNFSMKKLSNLGRWIATTVFCLSAIAFVWQGAFFADTS CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCH AMADNSTYLIATSDATDSLRNKSKEFIRDTKDNVKDAARTNASRVDDATDNGSTAERKAN HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHC KDASRIQKRAEEDAARTETAVDNNLNAVERTIDNIKGAFTNN CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA