| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228053
Identifier: 17228053
GI number: 17228053
Start: 648482
End: 650272
Strand: Direct
Name: 17228053
Synonym: alr0557
Alternate gene names: NA
Gene position: 648482-650272 (Clockwise)
Preceding gene: 17228052
Following gene: 17228054
Centisome position: 10.11
GC content: 32.55
Gene sequence:
>1791_bases ATGAAAGTTAGTATTTTAATTATCACATATAATCATAGTCATTTTATAGCACAAGCAATAGAAAGCGTATTAATGCAAAA AGTTAAGTTTGAGTATGAAATCGTTATAGGAGAAGATAGCTCTACAGATAATACACGCCAAATTTTACTTGACTATCAAA AACAATACTCGGATAAAATCCGGTTGTTGCTACCTGAAAAAAACTTAGGTATGCACAGAAATTTTGTCAATACATTGCAA GCCTGTCGCGGTGAATACATAGCAATTTTAGAAGGAGATGACTACTGGATTGCGGACGATAAACTACAAAAACAAGTAGA ATTTTTAGATGAAAATCCAGATTTTACAATATGTTTCCATAATGTTATGGTTTTTCATGAGGATAATCAATATCAACCTT ATATATTTCTTCATAATCAACCTACCGTATCTTACATAGAAGATTTATTAATACGCAACTTTATTTCTACACCCTCTGTA ATGTATCGTAATGGATTGGTAGAAAGTATACCTACTTGGTTTTATGAACAAGGTATGGGAGATTGGATTTTCCATATTCT TAACGCACAATATGGAAAAATTGGGTACATTGATGAAGTAATGTCAGCTTATAGAATTCATGTACAAGGAGTTTGGTCAA GTAAAAGTAGAGATTGGCAACTAAAAGAAACGATTAGAATGTTAGATACTATAAAATCTAATGTAAATGTGCGGTATGCA GAAATTATAGACAGAGCAGTTCAATTCTATTCAGAACAGTTATTATACTTGGTTCCTGAAAGTCAAGAAGTTACGCCTGT ATTAAATACAAGTTTACCAAATTATTTACAAATAAAAGATATAAACTTTATAGCGTTTCCTGACTGGAATCAGCCAGAAG AATTATTATATCAAAGTTTATATTATGCTATTAAACTATTCTTAACACATCCTGAAAATAATAAAATTGCTTTATTCATA GACACTACTGATATTAGCGAAGAGGATGCTGATATATATATATCTAGCACTTTAATGAATTTGATGCTAGAAGAGGAATT AGAGGAAAGTCACAAAATTAACGTATTTTTGATTGGTGAGCTAGACCAAATACAATGGCAAACTCTTTTATCTTTTCTGA AGGCTAGGATTGTCTTACCATCAGAGAATTTAGATGCAATTCTTGCTTCTGGGACAGCAATTATTCCATGCCTTACAGTA GAACAACTGATTGAATTTGATTTAACATTTATTGAATCTGCAAAACCTTATAAACTAAATATTGGCTGTGGAAATGTCAG GTTTCATGGGTGGATAAATATAGACATAGAGCAAAATTATAAGACAGTAGATTTAGTCTGCGATGCTAGACAAAAACTAC CATTCAATGATAACTCTTGTGACTTAATATATAATGAGCATTTTCTAGAACACTTAACTCTGGAGGAAGGATTATTTTTT TTGAAGGAATGCCATCGTATCCTAAAGCCTGAGGGAATTTTACGCATAGCGATGCCATCCTTAGAATATGTTGTGCAAAA ATATATGTCTGATGATTGGCGCAATCAAGAGTGGCTAAATTATCCAGAGTACCAGTTTATCAAAACTCGTGCTGAGATGT TAAATATTGCTATGCGTTGGTGGGGTCATCAGTGGCTCTATGATACAGAAGAGTTACACCGCAGATTAACCGAATCCGGA TATATAAATGTTCAAAACTTTGCATGGGGTAAGAGTAATACACCAGATTTAAGAAATCGTGAGACCAGAGTTGATTCAAT ACTAATATGTGAATCACAGGCACTGAAATGA
Upstream 100 bases:
>100_bases TGTAGAAATCATAAAACTAGTTGTAGAAAACAACAATTTTTTACAAGATAAATTAAGAAATTTACAACAAATATCAAACG TTATTTAAAAGGAAACAATC
Downstream 100 bases:
>100_bases TTCTATAAATAGGCTATCGAAAACTTAGCTAAATATACAATAACTAAAAAGCACGATGAAAACAAGAATTGCTAATGATG AGCCATTAGTTAGTATTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MKVSILIITYNHSHFIAQAIESVLMQKVKFEYEIVIGEDSSTDNTRQILLDYQKQYSDKIRLLLPEKNLGMHRNFVNTLQ ACRGEYIAILEGDDYWIADDKLQKQVEFLDENPDFTICFHNVMVFHEDNQYQPYIFLHNQPTVSYIEDLLIRNFISTPSV MYRNGLVESIPTWFYEQGMGDWIFHILNAQYGKIGYIDEVMSAYRIHVQGVWSSKSRDWQLKETIRMLDTIKSNVNVRYA EIIDRAVQFYSEQLLYLVPESQEVTPVLNTSLPNYLQIKDINFIAFPDWNQPEELLYQSLYYAIKLFLTHPENNKIALFI DTTDISEEDADIYISSTLMNLMLEEELEESHKINVFLIGELDQIQWQTLLSFLKARIVLPSENLDAILASGTAIIPCLTV EQLIEFDLTFIESAKPYKLNIGCGNVRFHGWINIDIEQNYKTVDLVCDARQKLPFNDNSCDLIYNEHFLEHLTLEEGLFF LKECHRILKPEGILRIAMPSLEYVVQKYMSDDWRNQEWLNYPEYQFIKTRAEMLNIAMRWWGHQWLYDTEELHRRLTESG YINVQNFAWGKSNTPDLRNRETRVDSILICESQALK
Sequences:
>Translated_596_residues MKVSILIITYNHSHFIAQAIESVLMQKVKFEYEIVIGEDSSTDNTRQILLDYQKQYSDKIRLLLPEKNLGMHRNFVNTLQ ACRGEYIAILEGDDYWIADDKLQKQVEFLDENPDFTICFHNVMVFHEDNQYQPYIFLHNQPTVSYIEDLLIRNFISTPSV MYRNGLVESIPTWFYEQGMGDWIFHILNAQYGKIGYIDEVMSAYRIHVQGVWSSKSRDWQLKETIRMLDTIKSNVNVRYA EIIDRAVQFYSEQLLYLVPESQEVTPVLNTSLPNYLQIKDINFIAFPDWNQPEELLYQSLYYAIKLFLTHPENNKIALFI DTTDISEEDADIYISSTLMNLMLEEELEESHKINVFLIGELDQIQWQTLLSFLKARIVLPSENLDAILASGTAIIPCLTV EQLIEFDLTFIESAKPYKLNIGCGNVRFHGWINIDIEQNYKTVDLVCDARQKLPFNDNSCDLIYNEHFLEHLTLEEGLFF LKECHRILKPEGILRIAMPSLEYVVQKYMSDDWRNQEWLNYPEYQFIKTRAEMLNIAMRWWGHQWLYDTEELHRRLTESG YINVQNFAWGKSNTPDLRNRETRVDSILICESQALK >Mature_596_residues MKVSILIITYNHSHFIAQAIESVLMQKVKFEYEIVIGEDSSTDNTRQILLDYQKQYSDKIRLLLPEKNLGMHRNFVNTLQ ACRGEYIAILEGDDYWIADDKLQKQVEFLDENPDFTICFHNVMVFHEDNQYQPYIFLHNQPTVSYIEDLLIRNFISTPSV MYRNGLVESIPTWFYEQGMGDWIFHILNAQYGKIGYIDEVMSAYRIHVQGVWSSKSRDWQLKETIRMLDTIKSNVNVRYA EIIDRAVQFYSEQLLYLVPESQEVTPVLNTSLPNYLQIKDINFIAFPDWNQPEELLYQSLYYAIKLFLTHPENNKIALFI DTTDISEEDADIYISSTLMNLMLEEELEESHKINVFLIGELDQIQWQTLLSFLKARIVLPSENLDAILASGTAIIPCLTV EQLIEFDLTFIESAKPYKLNIGCGNVRFHGWINIDIEQNYKTVDLVCDARQKLPFNDNSCDLIYNEHFLEHLTLEEGLFF LKECHRILKPEGILRIAMPSLEYVVQKYMSDDWRNQEWLNYPEYQFIKTRAEMLNIAMRWWGHQWLYDTEELHRRLTESG YINVQNFAWGKSNTPDLRNRETRVDSILICESQALK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 70258; Mature: 70258
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSILIITYNHSHFIAQAIESVLMQKVKFEYEIVIGEDSSTDNTRQILLDYQKQYSDKI CEEEEEEEEECCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCE RLLLPEKNLGMHRNFVNTLQACRGEYIAILEGDDYWIADDKLQKQVEFLDENPDFTICFH EEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHHHHCCCCCEEEEEE NVMVFHEDNQYQPYIFLHNQPTVSYIEDLLIRNFISTPSVMYRNGLVESIPTWFYEQGMG EEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCH DWIFHILNAQYGKIGYIDEVMSAYRIHVQGVWSSKSRDWQLKETIRMLDTIKSNVNVRYA HHHHHHHCCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEHH EIIDRAVQFYSEQLLYLVPESQEVTPVLNTSLPNYLQIKDINFIAFPDWNQPEELLYQSL HHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHH YYAIKLFLTHPENNKIALFIDTTDISEEDADIYISSTLMNLMLEEELEESHKINVFLIGE HHHHEEEEECCCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEECC LDQIQWQTLLSFLKARIVLPSENLDAILASGTAIIPCLTVEQLIEFDLTFIESAKPYKLN CHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEHHHHHHHHHHHHHEECCCCCEEEE IGCGNVRFHGWINIDIEQNYKTVDLVCDARQKLPFNDNSCDLIYNEHFLEHLTLEEGLFF ECCCCEEEEEEEEEEEECCCEEEEEEECHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHH LKECHRILKPEGILRIAMPSLEYVVQKYMSDDWRNQEWLNYPEYQFIKTRAEMLNIAMRW HHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH WGHQWLYDTEELHRRLTESGYINVQNFAWGKSNTPDLRNRETRVDSILICESQALK CCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHCCCEEEEECCCCCC >Mature Secondary Structure MKVSILIITYNHSHFIAQAIESVLMQKVKFEYEIVIGEDSSTDNTRQILLDYQKQYSDKI CEEEEEEEEECCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCE RLLLPEKNLGMHRNFVNTLQACRGEYIAILEGDDYWIADDKLQKQVEFLDENPDFTICFH EEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHHHHCCCCCEEEEEE NVMVFHEDNQYQPYIFLHNQPTVSYIEDLLIRNFISTPSVMYRNGLVESIPTWFYEQGMG EEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCH DWIFHILNAQYGKIGYIDEVMSAYRIHVQGVWSSKSRDWQLKETIRMLDTIKSNVNVRYA HHHHHHHCCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEHH EIIDRAVQFYSEQLLYLVPESQEVTPVLNTSLPNYLQIKDINFIAFPDWNQPEELLYQSL HHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHH YYAIKLFLTHPENNKIALFIDTTDISEEDADIYISSTLMNLMLEEELEESHKINVFLIGE HHHHEEEEECCCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEECC LDQIQWQTLLSFLKARIVLPSENLDAILASGTAIIPCLTVEQLIEFDLTFIESAKPYKLN CHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEHHHHHHHHHHHHHEECCCCCEEEE IGCGNVRFHGWINIDIEQNYKTVDLVCDARQKLPFNDNSCDLIYNEHFLEHLTLEEGLFF ECCCCEEEEEEEEEEEECCCEEEEEEECHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHH LKECHRILKPEGILRIAMPSLEYVVQKYMSDDWRNQEWLNYPEYQFIKTRAEMLNIAMRW HHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH WGHQWLYDTEELHRRLTESGYINVQNFAWGKSNTPDLRNRETRVDSILICESQALK CCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]