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The map label for this gene is pecE

Identifier: 17228022

GI number: 17228022

Start: 618519

End: 619280

Strand: Direct

Name: pecE

Synonym: alr0526

Alternate gene names: 17228022

Gene position: 618519-619280 (Clockwise)

Preceding gene: 17228021

Following gene: 17228023

Centisome position: 9.64

GC content: 41.21

Gene sequence:

>762_bases
GTGACTGCTGAACCAATTCTTTCTCCAGAAACAGCGATCGCAGCTTTATCTGGTGAGGATAACCAAATTCGTTATTATGC
TGCTTGGTGGTTGGGTAAACATAACGTACAGGCTGGTTTTACGGCGCTATGTGTAGCCTTATTTGATGAACGCTATCGCA
TCCCATCAGGAGGGTATCCTCTGCGTCGTCAGGCTGCACGGGCTTTAGGATTGTTGAAAAATCCCCAAGCTGTACCAGCC
TTAATTGCAGCATTGGAATGTGATGAGGATTTGCGTCTGAGGGAAGCAGTAATTTGCTCTTTAGCGGCGATCGGTGACAA
ACGTGCTGTGACTCCTTTACTCAATCTTTTGCAATCAAGTCAAGCACAACCTTATGAAGCTTTAATCGAAGCTTTAGCTA
CTCTACAAGTTTGGTCAGCCCGTCCACAAATTGAACCTTTTCTTCAGCATTATTCTGAGCGTGTGCAATGTGCAGCCGCT
AGATATATGTATCTTCTCACCCAAGAATCTGAATACATTGAACGTATTGTCAAAAATCTCAATCATGACAATATGTATTT
ACGTTGGGCGGCGGTATTTGATTTGGGTGCAGTTGCTCATCAACAAGCCGTACAGGCAATCTTAACGGCTCAGGTTCCTA
ATAGCTTAAAGCTCTTAAATTTAAAGCGTATTCTTGAAGCTATGTTGAATAATAATAGTGTTAATCATGAAAAAGCAGCT
TTATTATTTGGAGCAATTGATGATTTATTAATTCAACTTTAA

Upstream 100 bases:

>100_bases
GATAGTCAAGATTTCCCAAGTGTAGAAATGGTTGCTAGATACCCAACTTCTTGAAGAAGTGGGGTATCTGAGTAAATTTT
GAATTTCGGAGCAAAGCAAC

Downstream 100 bases:

>100_bases
AACTCATAACTGAATATTGGGGATTGGGGATTGGGGATTGGGGATTGGGGATTGGGGATTGGGGATTGGGGATTGGGGAT
TGGGGATTGGGGATTGGGGA

Product: bilin biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTAEPILSPETAIAALSGEDNQIRYYAAWWLGKHNVQAGFTALCVALFDERYRIPSGGYPLRRQAARALGLLKNPQAVPA
LIAALECDEDLRLREAVICSLAAIGDKRAVTPLLNLLQSSQAQPYEALIEALATLQVWSARPQIEPFLQHYSERVQCAAA
RYMYLLTQESEYIERIVKNLNHDNMYLRWAAVFDLGAVAHQQAVQAILTAQVPNSLKLLNLKRILEAMLNNNSVNHEKAA
LLFGAIDDLLIQL

Sequences:

>Translated_253_residues
MTAEPILSPETAIAALSGEDNQIRYYAAWWLGKHNVQAGFTALCVALFDERYRIPSGGYPLRRQAARALGLLKNPQAVPA
LIAALECDEDLRLREAVICSLAAIGDKRAVTPLLNLLQSSQAQPYEALIEALATLQVWSARPQIEPFLQHYSERVQCAAA
RYMYLLTQESEYIERIVKNLNHDNMYLRWAAVFDLGAVAHQQAVQAILTAQVPNSLKLLNLKRILEAMLNNNSVNHEKAA
LLFGAIDDLLIQL
>Mature_252_residues
TAEPILSPETAIAALSGEDNQIRYYAAWWLGKHNVQAGFTALCVALFDERYRIPSGGYPLRRQAARALGLLKNPQAVPAL
IAALECDEDLRLREAVICSLAAIGDKRAVTPLLNLLQSSQAQPYEALIEALATLQVWSARPQIEPFLQHYSERVQCAAAR
YMYLLTQESEYIERIVKNLNHDNMYLRWAAVFDLGAVAHQQAVQAILTAQVPNSLKLLNLKRILEAMLNNNSVNHEKAAL
LFGAIDDLLIQL

Specific function: An enzyme involved in the biosynthesis of bilin

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcE/RpcE/PecE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PECE_NOSS1 (P35791)

Other databases:

- EMBL:   AF178757
- EMBL:   BA000019
- PIR:   AE1872
- PIR:   D41841
- RefSeq:   NP_484570.1
- ProteinModelPortal:   P35791
- SMR:   P35791
- STRING:   P35791
- GeneID:   1104122
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr0526
- NMPDR:   fig|103690.1.peg.837
- eggNOG:   COG1413
- HOGENOM:   HBG554776
- OMA:   YAAWYLG
- ProtClustDB:   CLSK285773
- BioCyc:   NSP103690:ALR0526-MONOMER
- GO:   GO:0030089
- GO:   GO:0005488
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155
- Gene3D:   G3DSA:1.25.10.10
- SMART:   SM00567

Pfam domain/function: PF03130 HEAT_PBS; SSF48371 ARM-type_fold

EC number: 4.-.-.-

Molecular weight: Translated: 28176; Mature: 28045

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEPILSPETAIAALSGEDNQIRYYAAWWLGKHNVQAGFTALCVALFDERYRIPSGGYP
CCCCCCCCCCHHEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC
LRRQAARALGLLKNPQAVPALIAALECDEDLRLREAVICSLAAIGDKRAVTPLLNLLQSS
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
QAQPYEALIEALATLQVWSARPQIEPFLQHYSERVQCAAARYMYLLTQESEYIERIVKNL
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
NHDNMYLRWAAVFDLGAVAHQQAVQAILTAQVPNSLKLLNLKRILEAMLNNNSVNHEKAA
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
LLFGAIDDLLIQL
HHHHHHHHHHHCC
>Mature Secondary Structure 
TAEPILSPETAIAALSGEDNQIRYYAAWWLGKHNVQAGFTALCVALFDERYRIPSGGYP
CCCCCCCCCHHEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC
LRRQAARALGLLKNPQAVPALIAALECDEDLRLREAVICSLAAIGDKRAVTPLLNLLQSS
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
QAQPYEALIEALATLQVWSARPQIEPFLQHYSERVQCAAARYMYLLTQESEYIERIVKNL
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
NHDNMYLRWAAVFDLGAVAHQQAVQAILTAQVPNSLKLLNLKRILEAMLNNNSVNHEKAA
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
LLFGAIDDLLIQL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1556083; 11759840