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The map label for this gene is 17227836

Identifier: 17227836

GI number: 17227836

Start: 389300

End: 390490

Strand: Direct

Name: 17227836

Synonym: alr0340

Alternate gene names: NA

Gene position: 389300-390490 (Clockwise)

Preceding gene: 17227832

Following gene: 17227840

Centisome position: 6.07

GC content: 43.24

Gene sequence:

>1191_bases
ATGCCTAGCCTCAAACTCTCGCTGACTGGATTGCAAATCATCAAACAAGCTCGAAGCGAAAAAGGTTGGACAATTGATAA
TCCATGTTGGTTAGAACAAGCAAGCCAAATTCTTGAGCCTGGGCGTAACTGGGAAAATGCGGAAGTTTTTGCAGCCGGAG
TATCTTTAGCCACCTGGAAACGCTTCCTCAAAGGTGATGCAATTGATGCGTCGGTATTTAAAGCTTTTTGTCAGGTTTTG
GGATTGAATTGGCAAGACTTAGTGGAACGTCCCTCCAACTCATTCATCATTGAGACAACCCAAATCCCCAATATTCCCTT
ATTTTTTGGACGACGTTATGAACTGACAACACTCAGCCAAGCAATTGAACAAGGAACACGCCTAATTGCTATTACAGGGA
TTGGGGGTATGGGGAAAACGGCTTTAGCCACAAAGTTAGTAGAAAGCAGGTCATCTCATTTTTCTCAAACTCTATGGTTT
TCGTTTCACCACAACCCACCTGCTAAGGATAAAGTACCAACTTTGGTACCGCACAACCTAATGGTTTTTGATGGTTGGGA
TAGCATTTTAGGGGGTAAACGTGGGGGACAGTATCGCCCAGAATATGAACCATACGCCGACTTTCTCCGCACTGTAGTAC
AGACTACTCATAATAGTTGTGTGATTATCACTAGCCGAGAACAACCAGAGGGGTTAAATATTTTAAGTGCTGGAGGCGCA
GTTATTTTCCCCCTTGGTGGACTGATGGAAGGTGCAATTGAACTGTTGCAACATCATCAACTGACTTTTGATGCTCAACA
GTGGATTACTCTAGTTAATCAATATGGTGGTAATCCCTTGTTTCTGAATATGGCGGCTAATTTCATTCATGAATTATTTG
CTGGGGATGTGGGAGAGTTTTTAGCCTCTGGAACCTTAGTGGCTGGAGAATTTGCCCCCCTAGTAACGCAATGGCTGAAG
CAGATTTCTACTTTAGAACAAATCCTGATCAAGTCTTTGGCGACAAAGGTGCAAGGATTGACTCGCCAAGAGATCCTATT
GCAATTAGCTAGTGATGCTGCCAATGGGGATATTTTAGCAGCGCTCTTATCCTTAAAGCGGAGGGGGTTGATAGAAACGA
TGAAAGATAGTGAACTAGAACGCTTTTATTTACAGCCAGTCATTCTCAAGTGCGTGCAGCGTTTATTTTAA

Upstream 100 bases:

>100_bases
CTTAGACATAAAAAATATCTCAGGCGATCGCCCCCATAATTTTCCAGACTAATCTAGAATTAAACTGGATGAATTTGCTA
CACCTTCCTACTCATATCCA

Downstream 100 bases:

>100_bases
CCACCACCACCGCCGCCACCACCGCCGCCACCACCGCCTCCTCCTCCACCACCACCGCCACCATCACTGCTTCCATCACT
TCCGTAACTAACACTAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MPSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQILEPGRNWENAEVFAAGVSLATWKRFLKGDAIDASVFKAFCQVL
GLNWQDLVERPSNSFIIETTQIPNIPLFFGRRYELTTLSQAIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWF
SFHHNPPAKDKVPTLVPHNLMVFDGWDSILGGKRGGQYRPEYEPYADFLRTVVQTTHNSCVIITSREQPEGLNILSAGGA
VIFPLGGLMEGAIELLQHHQLTFDAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEFLASGTLVAGEFAPLVTQWLK
QISTLEQILIKSLATKVQGLTRQEILLQLASDAANGDILAALLSLKRRGLIETMKDSELERFYLQPVILKCVQRLF

Sequences:

>Translated_396_residues
MPSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQILEPGRNWENAEVFAAGVSLATWKRFLKGDAIDASVFKAFCQVL
GLNWQDLVERPSNSFIIETTQIPNIPLFFGRRYELTTLSQAIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWF
SFHHNPPAKDKVPTLVPHNLMVFDGWDSILGGKRGGQYRPEYEPYADFLRTVVQTTHNSCVIITSREQPEGLNILSAGGA
VIFPLGGLMEGAIELLQHHQLTFDAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEFLASGTLVAGEFAPLVTQWLK
QISTLEQILIKSLATKVQGLTRQEILLQLASDAANGDILAALLSLKRRGLIETMKDSELERFYLQPVILKCVQRLF
>Mature_395_residues
PSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQILEPGRNWENAEVFAAGVSLATWKRFLKGDAIDASVFKAFCQVLG
LNWQDLVERPSNSFIIETTQIPNIPLFFGRRYELTTLSQAIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWFS
FHHNPPAKDKVPTLVPHNLMVFDGWDSILGGKRGGQYRPEYEPYADFLRTVVQTTHNSCVIITSREQPEGLNILSAGGAV
IFPLGGLMEGAIELLQHHQLTFDAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEFLASGTLVAGEFAPLVTQWLKQ
ISTLEQILIKSLATKVQGLTRQEILLQLASDAANGDILAALLSLKRRGLIETMKDSELERFYLQPVILKCVQRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 43979; Mature: 43848

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQILEPGRNWENAEVFAAGVSLATWK
CCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHH
RFLKGDAIDASVFKAFCQVLGLNWQDLVERPSNSFIIETTQIPNIPLFFGRRYELTTLSQ
HHHCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCEECCCCCHHHHHHH
AIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWFSFHHNPPAKDKVPTLVPHNL
HHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCE
MVFDGWDSILGGKRGGQYRPEYEPYADFLRTVVQTTHNSCVIITSREQPEGLNILSAGGA
EEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCE
VIFPLGGLMEGAIELLQHHQLTFDAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEF
EEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCHHHH
LASGTLVAGEFAPLVTQWLKQISTLEQILIKSLATKVQGLTRQEILLQLASDAANGDILA
HHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH
ALLSLKRRGLIETMKDSELERFYLQPVILKCVQRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQILEPGRNWENAEVFAAGVSLATWK
CCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHH
RFLKGDAIDASVFKAFCQVLGLNWQDLVERPSNSFIIETTQIPNIPLFFGRRYELTTLSQ
HHHCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCEECCCCCHHHHHHH
AIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWFSFHHNPPAKDKVPTLVPHNL
HHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCE
MVFDGWDSILGGKRGGQYRPEYEPYADFLRTVVQTTHNSCVIITSREQPEGLNILSAGGA
EEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCE
VIFPLGGLMEGAIELLQHHQLTFDAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEF
EEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCHHHH
LASGTLVAGEFAPLVTQWLKQISTLEQILIKSLATKVQGLTRQEILLQLASDAANGDILA
HHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH
ALLSLKRRGLIETMKDSELERFYLQPVILKCVQRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]