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The map label for this gene is yfjD [C]

Identifier: 17227805

GI number: 17227805

Start: 354517

End: 355569

Strand: Direct

Name: yfjD [C]

Synonym: alr0309

Alternate gene names: 17227805

Gene position: 354517-355569 (Clockwise)

Preceding gene: 17227804

Following gene: 17227808

Centisome position: 5.53

GC content: 40.36

Gene sequence:

>1053_bases
ATGCTACAGCTAATAACTACCATCTTTGTTGTAATTCTAGGTTCAGCGTTGTGTTCTAGTATAGAAACGGCGCTGTTTTC
TGTTTCTACCCTCAGAGTCAGACAATTAGCACAATCGAATAACCCTTCAGCTGTTGCACTTTTGGCAATTCGAGAAAAGA
TGAATCGGCCAATTGCAACCATTGTTATTCTCAATAACATCTTTAATATTATTGGCAGTATCGTTACAGGTGGCGTTGCT
ACTCAGGCTTTGGGATCGCAATGGTTGGGAATCTTTTCGGCTGTATTAACATTCTTAATCATCATCTTTGGTGAAATCAT
TCCCAAAACCCTGGGGGAACGGTATTGTGAGCCAATTTCCCTGTTAGCAGCCATACCTATTACTGGACTTTCTATTGTCT
TTACACCTCTAGTATGGATTTTAGAAAACGTTACTGCACCGTTTTCTAAAGGGAAGAAAAGACCCACAACTAATGAGGCA
GAAATTAAGCTGTTGGCAAATATTGGTCAACAAGAAGGGATCATTGAAAGTGATGAAGCAGAAATGATTCAGAGGGTGTT
TAAGCTCAATGATGTAGTAGCTGCTGACCTCATGACTCCCCGAATTATGGTGACACATATTAACGGTAATTGGACGATCG
CTGAGGCACAGTCCGAGATCATCGCTTCCCAACATACCCGAATTATTGTGACGGATAATTCAATTGATCAAGTCATAGGC
TTCAGTTTAAAGCAGGAATTACTCACGGCGATCGTGGAAGGAAATCAAAATTACCAAGTCGCTAAACTGGTTCGTAAAGT
CCGCTTCGTTCCTGAAGTCATTCATGCAGATAGACTGTTGAAAAACTTCATAGAAGCTCGTGAACATTTAGCCGTGGTGG
TAGATGAATATGGTAGCGTCGCCGGTGTAGTTACTTTGGAAGATGTGTTGGAACTGATAACTGGTGAGATTGTTGATGAA
ACTGATAGAAATATTGATTTGCAAGAAATAGCCCGCAAAAAACGAGAGAAAATGTTGCAATCTATGACTGTTGACGGTTC
ATATTTGAAATAA

Upstream 100 bases:

>100_bases
AACCCTTTCTTCTCTTTTTTGATCAGTCTGAGGAATAATAACTCATAATAAAAATAATCATTCATGAGGAGATTATCCAT
TCCCAATCTTGGGAAACCTT

Downstream 100 bases:

>100_bases
AGCCAAAATTAAGGGTTGTAAGGCGGTGAAAAAGCAGGGGAGCGGGGAGTGTGTACTTACTCCAAAGGCGCTTATTTACC
AAGTCAAAATTCAGATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MLQLITTIFVVILGSALCSSIETALFSVSTLRVRQLAQSNNPSAVALLAIREKMNRPIATIVILNNIFNIIGSIVTGGVA
TQALGSQWLGIFSAVLTFLIIIFGEIIPKTLGERYCEPISLLAAIPITGLSIVFTPLVWILENVTAPFSKGKKRPTTNEA
EIKLLANIGQQEGIIESDEAEMIQRVFKLNDVVAADLMTPRIMVTHINGNWTIAEAQSEIIASQHTRIIVTDNSIDQVIG
FSLKQELLTAIVEGNQNYQVAKLVRKVRFVPEVIHADRLLKNFIEAREHLAVVVDEYGSVAGVVTLEDVLELITGEIVDE
TDRNIDLQEIARKKREKMLQSMTVDGSYLK

Sequences:

>Translated_350_residues
MLQLITTIFVVILGSALCSSIETALFSVSTLRVRQLAQSNNPSAVALLAIREKMNRPIATIVILNNIFNIIGSIVTGGVA
TQALGSQWLGIFSAVLTFLIIIFGEIIPKTLGERYCEPISLLAAIPITGLSIVFTPLVWILENVTAPFSKGKKRPTTNEA
EIKLLANIGQQEGIIESDEAEMIQRVFKLNDVVAADLMTPRIMVTHINGNWTIAEAQSEIIASQHTRIIVTDNSIDQVIG
FSLKQELLTAIVEGNQNYQVAKLVRKVRFVPEVIHADRLLKNFIEAREHLAVVVDEYGSVAGVVTLEDVLELITGEIVDE
TDRNIDLQEIARKKREKMLQSMTVDGSYLK
>Mature_350_residues
MLQLITTIFVVILGSALCSSIETALFSVSTLRVRQLAQSNNPSAVALLAIREKMNRPIATIVILNNIFNIIGSIVTGGVA
TQALGSQWLGIFSAVLTFLIIIFGEIIPKTLGERYCEPISLLAAIPITGLSIVFTPLVWILENVTAPFSKGKKRPTTNEA
EIKLLANIGQQEGIIESDEAEMIQRVFKLNDVVAADLMTPRIMVTHINGNWTIAEAQSEIIASQHTRIIVTDNSIDQVIG
FSLKQELLTAIVEGNQNYQVAKLVRKVRFVPEVIHADRLLKNFIEAREHLAVVVDEYGSVAGVVTLEDVLELITGEIVDE
TDRNIDLQEIARKKREKMLQSMTVDGSYLK

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=360, Percent_Identity=27.2222222222222, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI94681046, Length=292, Percent_Identity=26.027397260274, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI145693175, Length=312, Percent_Identity=27.5641025641026, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1790664, Length=363, Percent_Identity=25.3443526170799, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1786879, Length=161, Percent_Identity=33.5403726708075, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87082033, Length=187, Percent_Identity=35.8288770053476, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1788119, Length=148, Percent_Identity=31.7567567567568, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 38557; Mature: 38557

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLITTIFVVILGSALCSSIETALFSVSTLRVRQLAQSNNPSAVALLAIREKMNRPIAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHH
IVILNNIFNIIGSIVTGGVATQALGSQWLGIFSAVLTFLIIIFGEIIPKTLGERYCEPIS
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLAAIPITGLSIVFTPLVWILENVTAPFSKGKKRPTTNEAEIKLLANIGQQEGIIESDEA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
EMIQRVFKLNDVVAADLMTPRIMVTHINGNWTIAEAQSEIIASQHTRIIVTDNSIDQVIG
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEHHHHHHHHHCCCEEEEECCCHHHHHH
FSLKQELLTAIVEGNQNYQVAKLVRKVRFVPEVIHADRLLKNFIEAREHLAVVVDEYGSV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
AGVVTLEDVLELITGEIVDETDRNIDLQEIARKKREKMLQSMTVDGSYLK
EHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLQLITTIFVVILGSALCSSIETALFSVSTLRVRQLAQSNNPSAVALLAIREKMNRPIAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHH
IVILNNIFNIIGSIVTGGVATQALGSQWLGIFSAVLTFLIIIFGEIIPKTLGERYCEPIS
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLAAIPITGLSIVFTPLVWILENVTAPFSKGKKRPTTNEAEIKLLANIGQQEGIIESDEA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
EMIQRVFKLNDVVAADLMTPRIMVTHINGNWTIAEAQSEIIASQHTRIIVTDNSIDQVIG
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEHHHHHHHHHCCCEEEEECCCHHHHHH
FSLKQELLTAIVEGNQNYQVAKLVRKVRFVPEVIHADRLLKNFIEAREHLAVVVDEYGSV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
AGVVTLEDVLELITGEIVDETDRNIDLQEIARKKREKMLQSMTVDGSYLK
EHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]