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The map label for this gene is 172087689

Identifier: 172087689

GI number: 172087689

Start: 1196120

End: 1196734

Strand: Reverse

Name: 172087689

Synonym: VF_1085

Alternate gene names: NA

Gene position: 1196734-1196120 (Counterclockwise)

Preceding gene: 59711698

Following gene: 59711688

Centisome position: 41.3

GC content: 38.37

Gene sequence:

>615_bases
ATGAAAAAAATTGCACTTTTATTGGTATTATTTTCAGCATTTTCTAATGCTAACGATAACATTTCCGGCTTTTACTTAGG
TGCTGGCTTGGGTGCAACCACTTTTGATGATGGTGGCGCATTTGATTACACAGGCGCTTCTATCAATGCTGATGATTCAA
CCCTTAAATTCATGGGTGGCTACCAATTCAATCGTATTGTTGCTGTTGAACTTCAATACACAAAATATGGTGACATCAAT
GTAAACCATCCTACTGCTAAAGCAGCTGGCTTTAAAGGTATTGATATTGAATCAACGTCTATCTCACTAGCTGCAAACCT
AGGTTATACATTTGATAGCGGCTGGCGCCCATTTGGTATCGTTGGTTTAGGTTCATTAGAATCATCAACGAATGTACTAG
GCCACTCTCTAAGTGAAAATAATACATCTTTCCATTACGGTGTAGGTGTTGAATATGCACCAAAAGCACTAAGTGGATTG
GCTTTCCGTGTCGCTTATGAAGGTGATATGTTTATTGAAGAGAACGTATATCAAGATTACGGTTACTACAGCTACTCTGA
TGACTACGCAATGAATATTGGTACTTTTTACGCAGGTGCAACTTACAAGTTCTAA

Upstream 100 bases:

>100_bases
AACAAACAAAAAACAAATGTGAGTTTTCCATTTAGACTCTATAAGCAGCTTTCTTATAATGCCCCCTACTTTTCCTTCCC
AATTTATAAATGAGAATCCC

Downstream 100 bases:

>100_bases
GTTAAGACTTATTGCGAATACAAATCAAAACGGGTAGCCAAAAGCTACCCGTTTTTTATTAAAAAAAGATTGTTGTTTAT
TTTAGATTTACCGCTTTTTC

Product: outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein A

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKKIALLLVLFSAFSNANDNISGFYLGAGLGATTFDDGGAFDYTGASINADDSTLKFMGGYQFNRIVAVELQYTKYGDIN
VNHPTAKAAGFKGIDIESTSISLAANLGYTFDSGWRPFGIVGLGSLESSTNVLGHSLSENNTSFHYGVGVEYAPKALSGL
AFRVAYEGDMFIEENVYQDYGYYSYSDDYAMNIGTFYAGATYKF

Sequences:

>Translated_204_residues
MKKIALLLVLFSAFSNANDNISGFYLGAGLGATTFDDGGAFDYTGASINADDSTLKFMGGYQFNRIVAVELQYTKYGDIN
VNHPTAKAAGFKGIDIESTSISLAANLGYTFDSGWRPFGIVGLGSLESSTNVLGHSLSENNTSFHYGVGVEYAPKALSGL
AFRVAYEGDMFIEENVYQDYGYYSYSDDYAMNIGTFYAGATYKF
>Mature_204_residues
MKKIALLLVLFSAFSNANDNISGFYLGAGLGATTFDDGGAFDYTGASINADDSTLKFMGGYQFNRIVAVELQYTKYGDIN
VNHPTAKAAGFKGIDIESTSISLAANLGYTFDSGWRPFGIVGLGSLESSTNVLGHSLSENNTSFHYGVGVEYAPKALSGL
AFRVAYEGDMFIEENVYQDYGYYSYSDDYAMNIGTFYAGATYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22051; Mature: 22051

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIALLLVLFSAFSNANDNISGFYLGAGLGATTFDDGGAFDYTGASINADDSTLKFMGG
CCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCEECCCCCEEEEECC
YQFNRIVAVELQYTKYGDINVNHPTAKAAGFKGIDIESTSISLAANLGYTFDSGWRPFGI
CEECEEEEEEEEEEEECCEECCCCCHHHCCCCCCEECCCEEEEEEECCCEECCCCCEEEE
VGLGSLESSTNVLGHSLSENNTSFHYGVGVEYAPKALSGLAFRVAYEGDMFIEENVYQDY
EEECCCCCCCHHHEECCCCCCCEEEEECCCCCCCHHHCCEEEEEEECCCEEEECCCHHHC
GYYSYSDDYAMNIGTFYAGATYKF
CEEEECCCEEEEEEEEECCEEECC
>Mature Secondary Structure
MKKIALLLVLFSAFSNANDNISGFYLGAGLGATTFDDGGAFDYTGASINADDSTLKFMGG
CCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCEECCCCCEEEEECC
YQFNRIVAVELQYTKYGDINVNHPTAKAAGFKGIDIESTSISLAANLGYTFDSGWRPFGI
CEECEEEEEEEEEEEECCEECCCCCHHHCCCCCCEECCCEEEEEEECCCEECCCCCEEEE
VGLGSLESSTNVLGHSLSENNTSFHYGVGVEYAPKALSGLAFRVAYEGDMFIEENVYQDY
EEECCCCCCCHHHEECCCCCCCEEEEECCCCCCCHHHCCEEEEEEECCCEEEECCCHHHC
GYYSYSDDYAMNIGTFYAGATYKF
CEEEECCCEEEEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA