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The map label for this gene is ycfF [C]

Identifier: 170762377

GI number: 170762377

Start: 307834

End: 308292

Strand: Direct

Name: ycfF [C]

Synonym: UPA3_0281

Alternate gene names: 170762377

Gene position: 307834-308292 (Clockwise)

Preceding gene: 170762389

Following gene: 170761885

Centisome position: 40.95

GC content: 25.71

Gene sequence:

>459_bases
ATGCAAGATTGCATTTTTTGTAAAATTTTAAAAGGTGAAATTATTTCAAAAATAATAGATGAAAACGAATTTGCTATAGC
AATTTTAGACATTCAACCTGCAAGTGATGGTCATATGTTGATTATTCCTAAAAAACATTATCGCAATTTTTCACTAACTG
ATCCTATTTATCTAGATGGTATGATGCGTTTAGCAAAAAATATGACATTTGTTTTAGAAGAAGTTTTTCCTAATGTTTTA
GGTTTTAATTATTTAATGAATTCAAATTCTAGTGCTGGTCAAGTAATCATGCACACACATTTACACATCATTCCAAAACA
AAGTAATGGACGTGGTTTTGTTTTTAAAGCAATCAAAGAAGAAGGCGATATTAGTAATATTGATGAAATTTATAAAAAAA
TCATTATTAAAACACAAAAATTAAAAAAATCACGTTTAAGTAAGCATTATATGGTTTAA

Upstream 100 bases:

>100_bases
ATTATTAATTTTATAGTATTAATTATTCTAGTTGTAGATTATAATAAATTGAAAGCAATAGTTTTAAATAGTGGTATAAA
AAGAAAAGTGGAGGATAGTG

Downstream 100 bases:

>100_bases
TCAAAAAATATGGAACAAATTAGAAATTTAATTGATTTACAAATCAAACTAAAACCAATCCAAAAAGCATTTTATGATGC
GTGATCAAAAACATTTATTA

Product: histidine triad protein HIT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQDCIFCKILKGEIISKIIDENEFAIAILDIQPASDGHMLIIPKKHYRNFSLTDPIYLDGMMRLAKNMTFVLEEVFPNVL
GFNYLMNSNSSAGQVIMHTHLHIIPKQSNGRGFVFKAIKEEGDISNIDEIYKKIIIKTQKLKKSRLSKHYMV

Sequences:

>Translated_152_residues
MQDCIFCKILKGEIISKIIDENEFAIAILDIQPASDGHMLIIPKKHYRNFSLTDPIYLDGMMRLAKNMTFVLEEVFPNVL
GFNYLMNSNSSAGQVIMHTHLHIIPKQSNGRGFVFKAIKEEGDISNIDEIYKKIIIKTQKLKKSRLSKHYMV
>Mature_152_residues
MQDCIFCKILKGEIISKIIDENEFAIAILDIQPASDGHMLIIPKKHYRNFSLTDPIYLDGMMRLAKNMTFVLEEVFPNVL
GFNYLMNSNSSAGQVIMHTHLHIIPKQSNGRGFVFKAIKEEGDISNIDEIYKKIIIKTQKLKKSRLSKHYMV

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320078, Length=136, Percent_Identity=33.0882352941176, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 17473; Mature: 17473

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDCIFCKILKGEIISKIIDENEFAIAILDIQPASDGHMLIIPKKHYRNFSLTDPIYLDG
CCCCEEEHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCHHHHH
MMRLAKNMTFVLEEVFPNVLGFNYLMNSNSSAGQVIMHTHLHIIPKQSNGRGFVFKAIKE
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEEEEECCCCCCEEEEEEECC
EGDISNIDEIYKKIIIKTQKLKKSRLSKHYMV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQDCIFCKILKGEIISKIIDENEFAIAILDIQPASDGHMLIIPKKHYRNFSLTDPIYLDG
CCCCEEEHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCHHHHH
MMRLAKNMTFVLEEVFPNVLGFNYLMNSNSSAGQVIMHTHLHIIPKQSNGRGFVFKAIKE
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEEEEECCCCCCEEEEEEECC
EGDISNIDEIYKKIIIKTQKLKKSRLSKHYMV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]