Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is 170762194

Identifier: 170762194

GI number: 170762194

Start: 460730

End: 462178

Strand: Reverse

Name: 170762194

Synonym: UPA3_0417

Alternate gene names: NA

Gene position: 462178-460730 (Counterclockwise)

Preceding gene: 170762343

Following gene: 170762020

Centisome position: 61.49

GC content: 28.99

Gene sequence:

>1449_bases
ATGTTTAAGAAAAATAAAAAATCTTTAGCAGTATTGCTAGTAGGTTTTTCAACTGTTTTAATTTCAAGTATTGCGGTTGC
TGCTACAGCATGTGCAAGAAAAGACAATAACGTTAAAGAGGAAGGAAAAACAACACTTAATAAGTTAATTTCAAAAAAAG
CTCCAAAACAAAATGCAACTAAATCTAGTGAAAAATATATCTTAAGTGATGTTAATAATAGTAGTACTTTTTTTAATTCA
CTAACAGACCCTTATAAATGTTTTGAAATGTTTGCAAAATCATTGGATGATGCAGGTTATGAAATTACATCACATGAACC
TTTGAAAAATAGCGGTAAAACAAGTTTTTTAGAGTATGCTAAAGAACTTAATAATAAGATTCGTGAATATGTTAGAAAAG
TTGCTAATTTACCAACTATTAAAAAATTAAGAGATAATAATACAACTGTTTTATGAGCAGAATCAACACAAAGTTTTAAT
AGTTCAGATGCATCTAAATTAGATTTATACTATTTCCAACAAGAAGATTTATTCCCTTTATTGTATTCTCAACCAGATGA
TTCAAATGTTCCTGGGTTTGGTTTACGTTTTCCTAAACCAAAAAACCATAATGCTGATAAATATTTTGATAACTGACATG
GAATTGGTGCATCCCAAAATAATGCGTCAAAAAATGACTATGATTGAATGCTATCAATGCAAGAAGCTTTTTATGGAACT
GCGGATTATGTTTTCTTTAATTATGACTCAAACAATCTTGAAGGCAATGAAGATGGAGAGATTTTAAAATCAAATTTTGA
AAAATTCTTTAAGAAAACTGTTAATAATAACAAAATTATTCCAGTTGATTTTCAATTTGAATATTCTTCAATTTGAGGAC
CTATTGGAACAGTACGTTTAGTTCAATCACTTGCTAAAAGATTAGGGGTAAGTGATAGTGAATTAGCAAGTGTTAGTCTT
GATTGAACTATGCCATCAAAACAAACATTAAAACACATTCGTCCAAAAAATTCTAATAATGATCATAATAAATTTGCAAT
CTGATTCTATAATTTATGAGATCATTGTGTGGCATTGGGAATTCAACCAGACTATGCTTCATTCGTTAAAGAAAAAGGAA
AAACATATACTAAACTACCAGGATTTTTAGCTGATTTAGTAGATGAAACAAAAACCGAATTTAAAGATTTCACTGGTGAT
GCTCAAAAAGTTGCTGGTATGAATTTATATGCTCTAGGTGGTAATAATTCTCATATTAACCGTTCTTTTAAAACTCTTAT
TGGCAATGCAATACCAAAAGCTGTTCCTACTGAACGTGGCGATTCAAATAATTCTCGTTCACCAATTAATTTTGAATTCT
ATGATCGTACAACAAACACATTACAATCTGTTGAAGGAACAAAAGTTGTAAGTTGAACAGATCCAGCAAAAGAAAATAAA
CAAAAATAA

Upstream 100 bases:

>100_bases
TTTTGGTATATAAATCATAGAATATTTTCTTTTTACTATTAGAATGAAATTGTTTGTCAAAACAAAACAATATTATTTTA
AAAATGAGGATAATAAAAAT

Downstream 100 bases:

>100_bases
TTAAGTTTTTATGTTTAAGAATAAATCATTAAAATTTAAAAATAAATTAGATTGAAAAACACATTTTAGAAGACTTATAA
CATCTTTATTAATTATTTTA

Product: putative ABC substrate-binding protein - iron

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNATKSSEKYILSDVNNSSTFFNS
LTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYAKELNNKIREYVRKVANLPTIKKLRDNNTTVLWAESTQSFN
SSDASKLDLYYFQQEDLFPLLYSQPDDSNVPGFGLRFPKPKNHNADKYFDNWHGIGASQNNASKNDYDWMLSMQEAFYGT
ADYVFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSIWGPIGTVRLVQSLAKRLGVSDSELASVSL
DWTMPSKQTLKHIRPKNSNNDHNKFAIWFYNLWDHCVALGIQPDYASFVKEKGKTYTKLPGFLADLVDETKTEFKDFTGD
AQKVAGMNLYALGGNNSHINRSFKTLIGNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVSWTDPAKENK
QK

Sequences:

>Translated_482_residues
MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNATKSSEKYILSDVNNSSTFFNS
LTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYAKELNNKIREYVRKVANLPTIKKLRDNNTTVL*AESTQSFN
SSDASKLDLYYFQQEDLFPLLYSQPDDSNVPGFGLRFPKPKNHNADKYFDN*HGIGASQNNASKNDYD*MLSMQEAFYGT
ADYVFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSI*GPIGTVRLVQSLAKRLGVSDSELASVSL
D*TMPSKQTLKHIRPKNSNNDHNKFAI*FYNL*DHCVALGIQPDYASFVKEKGKTYTKLPGFLADLVDETKTEFKDFTGD
AQKVAGMNLYALGGNNSHINRSFKTLIGNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVS*TDPAKENK
QK
>Mature_482_residues
MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNATKSSEKYILSDVNNSSTFFNS
LTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYAKELNNKIREYVRKVANLPTIKKLRDNNTTVL*AESTQSFN
SSDASKLDLYYFQQEDLFPLLYSQPDDSNVPGFGLRFPKPKNHNADKYFDN*HGIGASQNNASKNDYD*MLSMQEAFYGT
ADYVFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSI*GPIGTVRLVQSLAKRLGVSDSELASVSL
D*TMPSKQTLKHIRPKNSNNDHNKFAI*FYNL*DHCVALGIQPDYASFVKEKGKTYTKLPGFLADLVDETKTEFKDFTGD
AQKVAGMNLYALGGNNSHINRSFKTLIGNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVS*TDPAKENK
QK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52891; Mature: 52891

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNAT
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
KSSEKYILSDVNNSSTFFNSLTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYA
CCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHH
KELNNKIREYVRKVANLPTIKKLRDNNTTVLAESTQSFNSSDASKLDLYYFQQEDLFPLL
HHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCHHE
YSQPDDSNVPGFGLRFPKPKNHNADKYFDNHGIGASQNNASKNDYDMLSMQEAFYGTADY
ECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
VFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSIGPIGTVRLVQSL
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHH
AKRLGVSDSELASVSLDTMPSKQTLKHIRPKNSNNDHNKFAIFYNLDHCVALGIQPDYAS
HHHHCCCCHHHHEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECCCCHHHH
FVKEKGKTYTKLPGFLADLVDETKTEFKDFTGDAQKVAGMNLYALGGNNSHINRSFKTLI
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCHHHHHHHHHH
GNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVSTDPAKENKQK
HHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNAT
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
KSSEKYILSDVNNSSTFFNSLTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYA
CCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHH
KELNNKIREYVRKVANLPTIKKLRDNNTTVLAESTQSFNSSDASKLDLYYFQQEDLFPLL
HHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCHHE
YSQPDDSNVPGFGLRFPKPKNHNADKYFDNHGIGASQNNASKNDYDMLSMQEAFYGTADY
ECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
VFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSIGPIGTVRLVQSL
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHH
AKRLGVSDSELASVSLDTMPSKQTLKHIRPKNSNNDHNKFAIFYNLDHCVALGIQPDYAS
HHHHCCCCHHHHEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECCCCHHHH
FVKEKGKTYTKLPGFLADLVDETKTEFKDFTGDAQKVAGMNLYALGGNNSHINRSFKTLI
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCHHHHHHHHHH
GNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVSTDPAKENKQK
HHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA