| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757842
Identifier: 170757842
GI number: 170757842
Start: 2824033
End: 2824671
Strand: Reverse
Name: 170757842
Synonym: CLD_1923
Alternate gene names: NA
Gene position: 2824671-2824033 (Counterclockwise)
Preceding gene: 170754752
Following gene: 170757297
Centisome position: 71.36
GC content: 23.32
Gene sequence:
>639_bases ATGGTAGCTTTTTTATTAATTGTTATAGGAATAGCACTTATATTTATAAATTTTAAAGCTATAAAAAAAGAAAAGGGTTC TTTTAGTGAAGCTCTTAAAGGTAGTATGGAAAATATAGATGAATATAAAAAAGAAATAGGATTAATAAGAAAAGAATTCG CGGAAACCTTAATAGATGTCCAAAAAGAGATGGAATATTTAAAAAAAGAGCTAAATGTTTTAAAGCATACATACGAAAAT AATATAGAAGTAGAAACTTTCTATAAGAAAAATCATAATATAAATTATCCTAAGGAAAGTTATAACAATTTATTCCAATC TAAATACATAGATAACAAGAACGACAAAAATATTTCCAAGGAAATAAATAAAAAAATAATGGTAAATGAAATAGATACAA ATAATTTAGAAAAAAACCAAAAAAATCACAAAGGTAGTCTAAAAAAGAAACATAGTAAAAGTGATTATCATAAAAAAAAC ATTGAAAAAGATAACTATAAAAATGGCTTAGAGAATAGCACAAAAGTTAATGAAGTAAACAAACTCCTTGAAGAAGGACA CACTGTAGAGGAAATATGTGAAATTCTTAATATAGGTAAGGGGGAAGTAATATTAATAAAAGAATTATACTCAAAATAA
Upstream 100 bases:
>100_bases AGAGTGTGTCAACTTCATAGTAGAGCTATAATCCATCTAAAGAAAGCTATGGCCAAATTAAAATATAATTAATAAACGGA ATTAATAGGGAGAATGAGAG
Downstream 100 bases:
>100_bases AAGAAATTATTAATTTTCTTTCCGATAGAAAAATTTTAATAGGTATAGGTATAGGTATAATTTTGGGTACAACTGTTATG ATTGGAGTAAAAATAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MVAFLLIVIGIALIFINFKAIKKEKGSFSEALKGSMENIDEYKKEIGLIRKEFAETLIDVQKEMEYLKKELNVLKHTYEN NIEVETFYKKNHNINYPKESYNNLFQSKYIDNKNDKNISKEINKKIMVNEIDTNNLEKNQKNHKGSLKKKHSKSDYHKKN IEKDNYKNGLENSTKVNEVNKLLEEGHTVEEICEILNIGKGEVILIKELYSK
Sequences:
>Translated_212_residues MVAFLLIVIGIALIFINFKAIKKEKGSFSEALKGSMENIDEYKKEIGLIRKEFAETLIDVQKEMEYLKKELNVLKHTYEN NIEVETFYKKNHNINYPKESYNNLFQSKYIDNKNDKNISKEINKKIMVNEIDTNNLEKNQKNHKGSLKKKHSKSDYHKKN IEKDNYKNGLENSTKVNEVNKLLEEGHTVEEICEILNIGKGEVILIKELYSK >Mature_212_residues MVAFLLIVIGIALIFINFKAIKKEKGSFSEALKGSMENIDEYKKEIGLIRKEFAETLIDVQKEMEYLKKELNVLKHTYEN NIEVETFYKKNHNINYPKESYNNLFQSKYIDNKNDKNISKEINKKIMVNEIDTNNLEKNQKNHKGSLKKKHSKSDYHKKN IEKDNYKNGLENSTKVNEVNKLLEEGHTVEEICEILNIGKGEVILIKELYSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24834; Mature: 24834
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAFLLIVIGIALIFINFKAIKKEKGSFSEALKGSMENIDEYKKEIGLIRKEFAETLIDV CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKEMEYLKKELNVLKHTYENNIEVETFYKKNHNINYPKESYNNLFQSKYIDNKNDKNISK HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH EINKKIMVNEIDTNNLEKNQKNHKGSLKKKHSKSDYHKKNIEKDNYKNGLENSTKVNEVN HHHHHHEEECCCCCCCHHHHHHHCCHHHHHHCHHHHHHHCCCCCHHHCCCCCCHHHHHHH KLLEEGHTVEEICEILNIGKGEVILIKELYSK HHHHCCCCHHHHHHHHCCCCCCEEEHHHHHCC >Mature Secondary Structure MVAFLLIVIGIALIFINFKAIKKEKGSFSEALKGSMENIDEYKKEIGLIRKEFAETLIDV CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKEMEYLKKELNVLKHTYENNIEVETFYKKNHNINYPKESYNNLFQSKYIDNKNDKNISK HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH EINKKIMVNEIDTNNLEKNQKNHKGSLKKKHSKSDYHKKNIEKDNYKNGLENSTKVNEVN HHHHHHEEECCCCCCCHHHHHHHCCHHHHHHCHHHHHHHCCCCCHHHCCCCCCHHHHHHH KLLEEGHTVEEICEILNIGKGEVILIKELYSK HHHHCCCCHHHHHHHHCCCCCCEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA