| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757297
Identifier: 170757297
GI number: 170757297
Start: 2823839
End: 2823970
Strand: Reverse
Name: 170757297
Synonym: CLD_1924
Alternate gene names: NA
Gene position: 2823970-2823839 (Counterclockwise)
Preceding gene: 170757842
Following gene: 170755952
Centisome position: 71.34
GC content: 28.03
Gene sequence:
>132_bases TTGGGTACAACTGTTATGATTGGAGTAAAAATAAATTATAATTTAAGTAAAAGCCAAATAGAAAGTAAGGCTAGAGGTTT AGGTATGGATTATCCCCAAGAAATGAAGGTTATAGACAAAACAAAAAAATAA
Upstream 100 bases:
>100_bases GGGAAGTAATATTAATAAAAGAATTATACTCAAAATAAAAGAAATTATTAATTTTCTTTCCGATAGAAAAATTTTAATAG GTATAGGTATAGGTATAATT
Downstream 100 bases:
>100_bases GTTATTTTTATATATTTAATTTTAAATATAAATTTATAAAGGAAAGTGAATGAGGTAGTGATAGTATGATAAGAAGTTTA TATACGGCTGTTTCTGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 42
Protein sequence:
>43_residues MGTTVMIGVKINYNLSKSQIESKARGLGMDYPQEMKVIDKTKK
Sequences:
>Translated_43_residues MGTTVMIGVKINYNLSKSQIESKARGLGMDYPQEMKVIDKTKK >Mature_42_residues GTTVMIGVKINYNLSKSQIESKARGLGMDYPQEMKVIDKTKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4833; Mature: 4702
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 9.3 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTVMIGVKINYNLSKSQIESKARGLGMDYPQEMKVIDKTKK CCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCC >Mature Secondary Structure GTTVMIGVKINYNLSKSQIESKARGLGMDYPQEMKVIDKTKK CCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA