| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yqgH [H]
Identifier: 170755547
GI number: 170755547
Start: 486474
End: 487346
Strand: Direct
Name: yqgH [H]
Synonym: CLD_0364
Alternate gene names: 170755547
Gene position: 486474-487346 (Clockwise)
Preceding gene: 170757827
Following gene: 170756415
Centisome position: 12.29
GC content: 27.84
Gene sequence:
>873_bases GTGAAAATTCTGTATAAATTTTGGGATAAAGTTTTTTATTACATAATAAAATTTTTTACATTCCTATCTATAGTAATTTT GTCTTTAATACTTATATTTATATTAAAGGAGAGTCTAGGTATATTTAAAAATATATCCTTTATAGATTTTATAACTAAAA GTACATGGGAACCTTTAGGAAAGTCACCTAAGTTATCTATATTGAGCTTTATAATGTCTACTATATATGTGACTTTTTTA GCAGTAATAATAGCCCTCCCTATAGCCATAGGTACTTCTATATTTTTAGCTAATATAGCTTCAGAAAGATTAAGAAATAT TTTAAAGCCTATAATAGATATGTTATCAGGTATTCCATCTGTAATATATGGTTTCATTGGTCTTTCTGTAGTTGTAAAAT TTTTTGAGAGAAGACTTGGTGTTTCATCTGGAGAATGTATTTTAAGTGCAGCCATAGTCTTGGCCATTATGATACTTCCC TTTATAATATCTAATTGCACTGATACCATGATAAAAGTTTATGATAAATATTTTATTTATTCAAAATCTCTAGGTATATC AAAATGGTATATGATGAATAATTTAATAATTCCTGCATCTAAAAAAGCTATATTAGCCTCTGTAATTTTAGCAGTAGGAA GAGGTATGGGTGAGACTATGGCAGTTATGATGGTTATAGGAAATAGTACGTTAATGCCAAAGCTATTAGGTAAAGGAGAA ACAATACCTTCCTTAATAGCCTTAGAGATGGGTTCGGCTCAGGTAGGTAGCATGCATTATAATGGACTTTTTGCATCAGG ATTAATACTTATGATAATGCTTTTTATTATAAATTTTATATTTTATATGCTAAAGAAAAATATGCAGCAATAA
Upstream 100 bases:
>100_bases GATTAGGACTTCTTATCCTATTTAAATAATTTTTATATATAGTTTATGTATAAAGTAAATAGCAATAGCTTCAGTTTATG CTACAAGATGCATTAAGGAG
Downstream 100 bases:
>100_bases TTTTATTTAAAAATTTTGTAGAAAAGGTGAGTTGTATGAAAAGATCCTTAAAAGATATTTTATTGTTACTTTGGTACTTT TTAAGCACCTTTTTAGTAGT
Product: phosphate ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKILYKFWDKVFYYIIKFFTFLSIVILSLILIFILKESLGIFKNISFIDFITKSTWEPLGKSPKLSILSFIMSTIYVTFL AVIIALPIAIGTSIFLANIASERLRNILKPIIDMLSGIPSVIYGFIGLSVVVKFFERRLGVSSGECILSAAIVLAIMILP FIISNCTDTMIKVYDKYFIYSKSLGISKWYMMNNLIIPASKKAILASVILAVGRGMGETMAVMMVIGNSTLMPKLLGKGE TIPSLIALEMGSAQVGSMHYNGLFASGLILMIMLFIINFIFYMLKKNMQQ
Sequences:
>Translated_290_residues MKILYKFWDKVFYYIIKFFTFLSIVILSLILIFILKESLGIFKNISFIDFITKSTWEPLGKSPKLSILSFIMSTIYVTFL AVIIALPIAIGTSIFLANIASERLRNILKPIIDMLSGIPSVIYGFIGLSVVVKFFERRLGVSSGECILSAAIVLAIMILP FIISNCTDTMIKVYDKYFIYSKSLGISKWYMMNNLIIPASKKAILASVILAVGRGMGETMAVMMVIGNSTLMPKLLGKGE TIPSLIALEMGSAQVGSMHYNGLFASGLILMIMLFIINFIFYMLKKNMQQ >Mature_290_residues MKILYKFWDKVFYYIIKFFTFLSIVILSLILIFILKESLGIFKNISFIDFITKSTWEPLGKSPKLSILSFIMSTIYVTFL AVIIALPIAIGTSIFLANIASERLRNILKPIIDMLSGIPSVIYGFIGLSVVVKFFERRLGVSSGECILSAAIVLAIMILP FIISNCTDTMIKVYDKYFIYSKSLGISKWYMMNNLIIPASKKAILASVILAVGRGMGETMAVMMVIGNSTLMPKLLGKGE TIPSLIALEMGSAQVGSMHYNGLFASGLILMIMLFIINFIFYMLKKNMQQ
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=246, Percent_Identity=30.0813008130081, Blast_Score=102, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32398; Mature: 32398
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILYKFWDKVFYYIIKFFTFLSIVILSLILIFILKESLGIFKNISFIDFITKSTWEPLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC KSPKLSILSFIMSTIYVTFLAVIIALPIAIGTSIFLANIASERLRNILKPIIDMLSGIPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIYGFIGLSVVVKFFERRLGVSSGECILSAAIVLAIMILPFIISNCTDTMIKVYDKYFIY HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKSLGISKWYMMNNLIIPASKKAILASVILAVGRGMGETMAVMMVIGNSTLMPKLLGKGE HCCCCCHHHHHHHCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCC TIPSLIALEMGSAQVGSMHYNGLFASGLILMIMLFIINFIFYMLKKNMQQ CCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKILYKFWDKVFYYIIKFFTFLSIVILSLILIFILKESLGIFKNISFIDFITKSTWEPLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC KSPKLSILSFIMSTIYVTFLAVIIALPIAIGTSIFLANIASERLRNILKPIIDMLSGIPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIYGFIGLSVVVKFFERRLGVSSGECILSAAIVLAIMILPFIISNCTDTMIKVYDKYFIY HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKSLGISKWYMMNNLIIPASKKAILASVILAVGRGMGETMAVMMVIGNSTLMPKLLGKGE HCCCCCHHHHHHHCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCC TIPSLIALEMGSAQVGSMHYNGLFASGLILMIMLFIINFIFYMLKKNMQQ CCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]