Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757822

Identifier: 170757822

GI number: 170757822

Start: 3289508

End: 3289720

Strand: Reverse

Name: 170757822

Synonym: CLD_1499

Alternate gene names: NA

Gene position: 3289720-3289508 (Counterclockwise)

Preceding gene: 170757007

Following gene: 170756848

Centisome position: 83.11

GC content: 27.7

Gene sequence:

>213_bases
GTGGCAGTAATAAAAACAAAAGAATATAGAAGAATAAGAAACTTATCTATTTCAAAATTGAGTTACAAAAGTAAAATAGC
TAGAAGTTATATTACAGAATTAGAGGAAGGTAAATATGAAAATCCAGGGTTAAAGGTTATTTGTAATCTATGCAAAACAT
TGAAAATTACACCTAATGAATTGATAGATCAAGAACTATGGAGGTGGTGGTAA

Upstream 100 bases:

>100_bases
ATAGACGAACTTTTTTTTAAAAGAAATAGTAAACTTTAGGAATACTTAAAAATTTATAGTTTAATATTGAGAGGAATAAA
TCCTAAGGAGGAATCCTCAA

Downstream 100 bases:

>100_bases
ACATAGTAAATCAATAATTATTAAAGAAGTATAGAAAAACTATATATAAATTATGGATTGATTTAATTATAGCAATATTT
TATTTCGTGTAATATGGATA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MAVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNELIDQELWRWW

Sequences:

>Translated_70_residues
MAVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNELIDQELWRWW
>Mature_69_residues
AVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNELIDQELWRWW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8404; Mature: 8273

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNE
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHH
LIDQELWRWW
HHHHHHHHCC
>Mature Secondary Structure 
AVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNE
CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHH
LIDQELWRWW
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA