| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757822
Identifier: 170757822
GI number: 170757822
Start: 3289508
End: 3289720
Strand: Reverse
Name: 170757822
Synonym: CLD_1499
Alternate gene names: NA
Gene position: 3289720-3289508 (Counterclockwise)
Preceding gene: 170757007
Following gene: 170756848
Centisome position: 83.11
GC content: 27.7
Gene sequence:
>213_bases GTGGCAGTAATAAAAACAAAAGAATATAGAAGAATAAGAAACTTATCTATTTCAAAATTGAGTTACAAAAGTAAAATAGC TAGAAGTTATATTACAGAATTAGAGGAAGGTAAATATGAAAATCCAGGGTTAAAGGTTATTTGTAATCTATGCAAAACAT TGAAAATTACACCTAATGAATTGATAGATCAAGAACTATGGAGGTGGTGGTAA
Upstream 100 bases:
>100_bases ATAGACGAACTTTTTTTTAAAAGAAATAGTAAACTTTAGGAATACTTAAAAATTTATAGTTTAATATTGAGAGGAATAAA TCCTAAGGAGGAATCCTCAA
Downstream 100 bases:
>100_bases ACATAGTAAATCAATAATTATTAAAGAAGTATAGAAAAACTATATATAAATTATGGATTGATTTAATTATAGCAATATTT TATTTCGTGTAATATGGATA
Product: putative DNA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MAVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNELIDQELWRWW
Sequences:
>Translated_70_residues MAVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNELIDQELWRWW >Mature_69_residues AVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNELIDQELWRWW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8404; Mature: 8273
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNE CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHH LIDQELWRWW HHHHHHHHCC >Mature Secondary Structure AVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNE CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHH LIDQELWRWW HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA