| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757007
Identifier: 170757007
GI number: 170757007
Start: 3289782
End: 3289991
Strand: Reverse
Name: 170757007
Synonym: CLD_1498
Alternate gene names: NA
Gene position: 3289991-3289782 (Counterclockwise)
Preceding gene: 170757586
Following gene: 170757822
Centisome position: 83.12
GC content: 27.62
Gene sequence:
>210_bases ATGACAACAGCAAAAAAATTAAAAGCTTATAGATGCCTAAAAGGTGCAAAGCAAGAGGATATAGCAAGACTAATAGGAGT GTCTCTAAATACGTATAATTTTAAAGAAAATGGTAAGAAGTCTTTTACTTTAAATGAGGCTAAGATTATATCAGATTTTT TTGATACTACCATAGACGAACTTTTTTTTAAAAGAAATAGTAAACTTTAG
Upstream 100 bases:
>100_bases GATAAAATACAGTTGAAAGTATTCTTAATGTTGACTATAATAAAAATATAAATAGTATTCTTATAGTTTACTTAAAAAAG CTATTAAGGGGGTGGGTTTT
Downstream 100 bases:
>100_bases GAATACTTAAAAATTTATAGTTTAATATTGAGAGGAATAAATCCTAAGGAGGAATCCTCAAGTGGCAGTAATAAAAACAA AAGAATATAGAAGAATAAGA
Product: DNA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MTTAKKLKAYRCLKGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDELFFKRNSKL
Sequences:
>Translated_69_residues MTTAKKLKAYRCLKGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDELFFKRNSKL >Mature_68_residues TTAKKLKAYRCLKGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDELFFKRNSKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7954; Mature: 7823
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAKKLKAYRCLKGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDE CCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHH LFFKRNSKL HHHHCCCCC >Mature Secondary Structure TTAKKLKAYRCLKGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDE CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHH LFFKRNSKL HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA