| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is lgt
Identifier: 170757761
GI number: 170757761
Start: 3485324
End: 3486088
Strand: Reverse
Name: lgt
Synonym: CLD_1323
Alternate gene names: 170757761
Gene position: 3486088-3485324 (Counterclockwise)
Preceding gene: 170755114
Following gene: 170756260
Centisome position: 88.07
GC content: 28.5
Gene sequence:
>765_bases ATGAATCCAATAGCATTTCATGTAGGAAATTTAGCAATTAGATGGTATGGTGTAGTGATATCTATAGGAGCAGCATTAGG GCTACTATTGGCTATGTATAATTGTAAAATAAGAGAAGTAAGTTATGATGAATTTATAAATATGTTTTTAATAGCTTTTC CATCAGCTATTATAGGAGCTAGATTATATTATGTTATTTTTGAGTTTGAGGATTATAGGGATAATTTAATTAATATTTTT AACATAAGACAGGGTGGCTTAGCCATTCATGGGGGAATTATTTTTGGAGTTTTGGCAGTATATATATATCTAAAATATAG AAAAGAGAGTTTTTTTGAATATGTAGATGTGGCGGCCCCTTCTATAATACTAGGTCAGGCCATTGGAAGATGGGGAAATT TCTTTAATTCAGAAGCTCATGGTGGACCTGTTACAAAAGAATTTATAAGTAAATTTCCACAGTTTATACAAAACGGAATG TTTATTGAGGGCACTTATTATCATCCCACATTTTTGTATGAGTCAATTTGGAACTTTATAGTATGTATTTTTCTTGTTTA TCTTTTGAAAAAGACCAAAAAGAAAGGTATAGTTTTTATGGCTTACATAGGATTATATTCTTTAGGAAGATTTTTTATAG AGGGGTTGAGAACAGATAGTTTATATTTAGGATCTATAAGAGTAGCTCAACTTATAAGTGTATTAGGCATAATTTTGTCT ATATTTTTTATATATAATATTATAAAAAAAGAGAAAAGATATTAA
Upstream 100 bases:
>100_bases TTAAAATTAATATTTATTAAACTTTAAAATTAAAATTTCTATTTATATGGTATTTATAGTATAATTACCGTATAAAATAT ATAGAATAAAGGTGATATAA
Downstream 100 bases:
>100_bases GATGAAAACAAGATCAAATATTAATAGACATTAATAAAAACTTATGCTAATATATAAAAGAATTTTGGGCGATGAAGTTC GCCATTAAATGCGTAAAGCT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNPIAFHVGNLAIRWYGVVISIGAALGLLLAMYNCKIREVSYDEFINMFLIAFPSAIIGARLYYVIFEFEDYRDNLINIF NIRQGGLAIHGGIIFGVLAVYIYLKYRKESFFEYVDVAAPSIILGQAIGRWGNFFNSEAHGGPVTKEFISKFPQFIQNGM FIEGTYYHPTFLYESIWNFIVCIFLVYLLKKTKKKGIVFMAYIGLYSLGRFFIEGLRTDSLYLGSIRVAQLISVLGIILS IFFIYNIIKKEKRY
Sequences:
>Translated_254_residues MNPIAFHVGNLAIRWYGVVISIGAALGLLLAMYNCKIREVSYDEFINMFLIAFPSAIIGARLYYVIFEFEDYRDNLINIF NIRQGGLAIHGGIIFGVLAVYIYLKYRKESFFEYVDVAAPSIILGQAIGRWGNFFNSEAHGGPVTKEFISKFPQFIQNGM FIEGTYYHPTFLYESIWNFIVCIFLVYLLKKTKKKGIVFMAYIGLYSLGRFFIEGLRTDSLYLGSIRVAQLISVLGIILS IFFIYNIIKKEKRY >Mature_254_residues MNPIAFHVGNLAIRWYGVVISIGAALGLLLAMYNCKIREVSYDEFINMFLIAFPSAIIGARLYYVIFEFEDYRDNLINIF NIRQGGLAIHGGIIFGVLAVYIYLKYRKESFFEYVDVAAPSIILGQAIGRWGNFFNSEAHGGPVTKEFISKFPQFIQNGM FIEGTYYHPTFLYESIWNFIVCIFLVYLLKKTKKKGIVFMAYIGLYSLGRFFIEGLRTDSLYLGSIRVAQLISVLGIILS IFFIYNIIKKEKRY
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=268, Percent_Identity=26.4925373134328, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 29199; Mature: 29199
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIAFHVGNLAIRWYGVVISIGAALGLLLAMYNCKIREVSYDEFINMFLIAFPSAIIGA CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHH RLYYVIFEFEDYRDNLINIFNIRQGGLAIHGGIIFGVLAVYIYLKYRKESFFEYVDVAAP HHHHHEEEEHHHHCCCEEHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SIILGQAIGRWGNFFNSEAHGGPVTKEFISKFPQFIQNGMFIEGTYYHPTFLYESIWNFI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHH VCIFLVYLLKKTKKKGIVFMAYIGLYSLGRFFIEGLRTDSLYLGSIRVAQLISVLGIILS HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHH IFFIYNIIKKEKRY HHHHHHHHHHHCCC >Mature Secondary Structure MNPIAFHVGNLAIRWYGVVISIGAALGLLLAMYNCKIREVSYDEFINMFLIAFPSAIIGA CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHH RLYYVIFEFEDYRDNLINIFNIRQGGLAIHGGIIFGVLAVYIYLKYRKESFFEYVDVAAP HHHHHEEEEHHHHCCCEEHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SIILGQAIGRWGNFFNSEAHGGPVTKEFISKFPQFIQNGMFIEGTYYHPTFLYESIWNFI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHH VCIFLVYLLKKTKKKGIVFMAYIGLYSLGRFFIEGLRTDSLYLGSIRVAQLISVLGIILS HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHH IFFIYNIIKKEKRY HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA