| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755114
Identifier: 170755114
GI number: 170755114
Start: 3486297
End: 3486761
Strand: Reverse
Name: 170755114
Synonym: CLD_1322
Alternate gene names: NA
Gene position: 3486761-3486297 (Counterclockwise)
Preceding gene: 170754314
Following gene: 170757761
Centisome position: 88.09
GC content: 25.59
Gene sequence:
>465_bases ATGGATAAGCATACTAGCAAAATAGAGAAACTTATAGATAAATGTTTTAAAGATGTAGATTTAATAATTCATTTAGGAGA CTTTACTTCTCCAAGGGTTTTAGAGAAAATAAAGAAAAAGAAAAAAGTTATAGGCGTTTGGGGAAATAATGATAAAAATG GATTAAGACAAGAGTTAAAGGAAAAAGAAATAGTTATTTTAAATGGATATAAAGTAGGTTTGTTTCATGGACATGGAACA GAAAAAAACACATTAGATAGAATTTATAGTATTTTTAAAGATGACAATGTAGATATCATATTATTTGGACATAGCCATCA GCCTATGATAAAAACTAAAAATAAAACTCTTATTATAAATCCAGGATCGCCAAGCAAAAAAATAAGAGAAAGATGGTTTT CTTATGTGGTTTTAAGTCTAAAGAAAGAAAAAATAGAAGCTAAAATTTGTTTTTACAATAAGTAA
Upstream 100 bases:
>100_bases CGGAAAAGAAATTTATTTGTATTCTGATTTTTGTAACCATTGTGGTAAAGAACAGTAGGAAGGTGATATTATCAAAATAG GTGTTATATCAGATACTCAT
Downstream 100 bases:
>100_bases GTAAAATATTACAATATTTCCGTGGAAATAATTAAATATTTGTAATATTTTACAGAAATTTTTTAAAAAGATAATAGGGC TAGAGTTTAATAAATATTAA
Product: phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELKEKEIVILNGYKVGLFHGHGT EKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIINPGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK
Sequences:
>Translated_154_residues MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELKEKEIVILNGYKVGLFHGHGT EKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIINPGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK >Mature_154_residues MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELKEKEIVILNGYKVGLFHGHGT EKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIINPGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 17936; Mature: 17936
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELK CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHC EKEIVILNGYKVGLFHGHGTEKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIIN CCCEEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCEEEEE PGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELK CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHC EKEIVILNGYKVGLFHGHGTEKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIIN CCCEEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCEEEEE PGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]