Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755114

Identifier: 170755114

GI number: 170755114

Start: 3486297

End: 3486761

Strand: Reverse

Name: 170755114

Synonym: CLD_1322

Alternate gene names: NA

Gene position: 3486761-3486297 (Counterclockwise)

Preceding gene: 170754314

Following gene: 170757761

Centisome position: 88.09

GC content: 25.59

Gene sequence:

>465_bases
ATGGATAAGCATACTAGCAAAATAGAGAAACTTATAGATAAATGTTTTAAAGATGTAGATTTAATAATTCATTTAGGAGA
CTTTACTTCTCCAAGGGTTTTAGAGAAAATAAAGAAAAAGAAAAAAGTTATAGGCGTTTGGGGAAATAATGATAAAAATG
GATTAAGACAAGAGTTAAAGGAAAAAGAAATAGTTATTTTAAATGGATATAAAGTAGGTTTGTTTCATGGACATGGAACA
GAAAAAAACACATTAGATAGAATTTATAGTATTTTTAAAGATGACAATGTAGATATCATATTATTTGGACATAGCCATCA
GCCTATGATAAAAACTAAAAATAAAACTCTTATTATAAATCCAGGATCGCCAAGCAAAAAAATAAGAGAAAGATGGTTTT
CTTATGTGGTTTTAAGTCTAAAGAAAGAAAAAATAGAAGCTAAAATTTGTTTTTACAATAAGTAA

Upstream 100 bases:

>100_bases
CGGAAAAGAAATTTATTTGTATTCTGATTTTTGTAACCATTGTGGTAAAGAACAGTAGGAAGGTGATATTATCAAAATAG
GTGTTATATCAGATACTCAT

Downstream 100 bases:

>100_bases
GTAAAATATTACAATATTTCCGTGGAAATAATTAAATATTTGTAATATTTTACAGAAATTTTTTAAAAAGATAATAGGGC
TAGAGTTTAATAAATATTAA

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELKEKEIVILNGYKVGLFHGHGT
EKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIINPGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK

Sequences:

>Translated_154_residues
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELKEKEIVILNGYKVGLFHGHGT
EKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIINPGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK
>Mature_154_residues
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELKEKEIVILNGYKVGLFHGHGT
EKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIINPGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK

Specific function: Unknown

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 17936; Mature: 17936

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELK
CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHC
EKEIVILNGYKVGLFHGHGTEKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIIN
CCCEEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCEEEEE
PGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK
CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
>Mature Secondary Structure
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDKNGLRQELK
CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHC
EKEIVILNGYKVGLFHGHGTEKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIIN
CCCEEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCEEEEE
PGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK
CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]