| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757732
Identifier: 170757732
GI number: 170757732
Start: 3495392
End: 3495643
Strand: Reverse
Name: 170757732
Synonym: CLD_1315
Alternate gene names: NA
Gene position: 3495643-3495392 (Counterclockwise)
Preceding gene: 170754875
Following gene: 170756881
Centisome position: 88.31
GC content: 32.94
Gene sequence:
>252_bases ATGAAGTACAAAATAGGACAAGAGATAGAGTTTACAAATAGCTTTGTGGTAGAGCTACGCAAAGGTGGGGCAGTTAAAGT TGACCCAGGAGATAAAGCTATGATAGTAAGAAAAATAGATGATAATACAGGGGAGATTGTATACACTACAGGTAATGCTA AGGGATTAAGTCAAAATATACAGATAGAAGTTGATGAAGCTTTGAATGAGGAAGAGTTAGCAAAAAAAATATTAGAAGAA ATGTATAAATAA
Upstream 100 bases:
>100_bases TCTTCGATTTGGTGCAAATCGCTTTCACAGAGTGCGATGGGAGTGTTAGAGCGGTTAGTCATCGGGTAAAATTTTAGATG CATAGAAAGAAGGAAAGATT
Downstream 100 bases:
>100_bases AATATATAATGTGTAATAAATTTCATAAAAAGGAATAACATGAATAAATTTATTTTATATTGACAGAATGTTCGTAATGA TATAAAATAAAATTAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MKYKIGQEIEFTNSFVVELRKGGAVKVDPGDKAMIVRKIDDNTGEIVYTTGNAKGLSQNIQIEVDEALNEEELAKKILEE MYK
Sequences:
>Translated_83_residues MKYKIGQEIEFTNSFVVELRKGGAVKVDPGDKAMIVRKIDDNTGEIVYTTGNAKGLSQNIQIEVDEALNEEELAKKILEE MYK >Mature_83_residues MKYKIGQEIEFTNSFVVELRKGGAVKVDPGDKAMIVRKIDDNTGEIVYTTGNAKGLSQNIQIEVDEALNEEELAKKILEE MYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9336; Mature: 9336
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKIGQEIEFTNSFVVELRKGGAVKVDPGDKAMIVRKIDDNTGEIVYTTGNAKGLSQNI CCCCCCCEEECCCEEEEEECCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCCCCE QIEVDEALNEEELAKKILEEMYK EEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKYKIGQEIEFTNSFVVELRKGGAVKVDPGDKAMIVRKIDDNTGEIVYTTGNAKGLSQNI CCCCCCCEEECCCEEEEEECCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCCCCE QIEVDEALNEEELAKKILEEMYK EEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA