Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170757667

Identifier: 170757667

GI number: 170757667

Start: 297638

End: 298393

Strand: Direct

Name: 170757667

Synonym: CLD_0527

Alternate gene names: NA

Gene position: 297638-298393 (Clockwise)

Preceding gene: 170755434

Following gene: 170756577

Centisome position: 7.52

GC content: 23.54

Gene sequence:

>756_bases
ATGAGTAATTTAATTAGAGGGGAATTTTATAAATTAAGAAAAAGTAAGTATTTTATTGGAATAATCTTTTTAACATTGAT
AATTTCATATTTTTTGCTTAGACGTTTTTATGCAATTGTAACAAGTGTAGGAACTCCATCTCTTGAACTCCAAAATGGAA
TGTATTCAATAGAATATGCATTTGAAAATATCATAGGTACAAGCTTTATATTTTCTTTATTTGCAGGAGAATTTGTTGCT
AAAGATTTAAAAAATAATATGAGTAAAAGTTTTACTTATGGATATAAGAGAAGTAAAGTTATATTAAGCAAATTAATAGT
TTTTATAATATCTTTTTTATTTTTAGAATTAATATATATAACAATTTTAGTTATACATACCTCAATTGCCTATGGATTTT
ATAAAGTTTTAAATTATAGCGCTATATTATATTTAATTAGACTGATTGTTATTGGAATAATGTATAATGTAGCAACAATG
TCTATAGTTTTTATGATTGCTATAATAACAAAAAGTAATGTGTGTACAGTTGTTTCACCAGCTTTATTTATGTTAGCAAT
AACAGCATCATTAAATTCTAAGGCACCTATTCCAAGTATAGTTTCATTTGTATTTCCTTTTATTGTTTGTGAAAAAGCAC
TAGCCAGATTTGCTTCCAATTTAGATATTATAATTGCAATAATTTCATCAGTAGCAATCTTTACAATAACAACTCTAATA
AGTCTTTTATATGTAAAGCATAAAGATATTAAGTAA

Upstream 100 bases:

>100_bases
ACTCTGGCTCTATCTAAGCATAAGATAGGAGTTAAAGAAATAATGAAAATGGGTGAATCACTAGAAGATTATTTCACTAA
ATTAGTTGGAGGGGAAAATA

Downstream 100 bases:

>100_bases
TTCAGATAAAAAGATTATTTGATATATAAAGCATGAAGATATTAAATAATTAAGAAAAAATCTATTATATAAATTAGGAG
AATTGAGATGTATTTATTAG

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSNLIRGEFYKLRKSKYFIGIIFLTLIISYFLLRRFYAIVTSVGTPSLELQNGMYSIEYAFENIIGTSFIFSLFAGEFVA
KDLKNNMSKSFTYGYKRSKVILSKLIVFIISFLFLELIYITILVIHTSIAYGFYKVLNYSAILYLIRLIVIGIMYNVATM
SIVFMIAIITKSNVCTVVSPALFMLAITASLNSKAPIPSIVSFVFPFIVCEKALARFASNLDIIIAIISSVAIFTITTLI
SLLYVKHKDIK

Sequences:

>Translated_251_residues
MSNLIRGEFYKLRKSKYFIGIIFLTLIISYFLLRRFYAIVTSVGTPSLELQNGMYSIEYAFENIIGTSFIFSLFAGEFVA
KDLKNNMSKSFTYGYKRSKVILSKLIVFIISFLFLELIYITILVIHTSIAYGFYKVLNYSAILYLIRLIVIGIMYNVATM
SIVFMIAIITKSNVCTVVSPALFMLAITASLNSKAPIPSIVSFVFPFIVCEKALARFASNLDIIIAIISSVAIFTITTLI
SLLYVKHKDIK
>Mature_250_residues
SNLIRGEFYKLRKSKYFIGIIFLTLIISYFLLRRFYAIVTSVGTPSLELQNGMYSIEYAFENIIGTSFIFSLFAGEFVAK
DLKNNMSKSFTYGYKRSKVILSKLIVFIISFLFLELIYITILVIHTSIAYGFYKVLNYSAILYLIRLIVIGIMYNVATMS
IVFMIAIITKSNVCTVVSPALFMLAITASLNSKAPIPSIVSFVFPFIVCEKALARFASNLDIIIAIISSVAIFTITTLIS
LLYVKHKDIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28358; Mature: 28226

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLIRGEFYKLRKSKYFIGIIFLTLIISYFLLRRFYAIVTSVGTPSLELQNGMYSIEYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHH
FENIIGTSFIFSLFAGEFVAKDLKNNMSKSFTYGYKRSKVILSKLIVFIISFLFLELIYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TILVIHTSIAYGFYKVLNYSAILYLIRLIVIGIMYNVATMSIVFMIAIITKSNVCTVVSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ALFMLAITASLNSKAPIPSIVSFVFPFIVCEKALARFASNLDIIIAIISSVAIFTITTLI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SLLYVKHKDIK
HHHHHHHCCCC
>Mature Secondary Structure 
SNLIRGEFYKLRKSKYFIGIIFLTLIISYFLLRRFYAIVTSVGTPSLELQNGMYSIEYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHH
FENIIGTSFIFSLFAGEFVAKDLKNNMSKSFTYGYKRSKVILSKLIVFIISFLFLELIYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TILVIHTSIAYGFYKVLNYSAILYLIRLIVIGIMYNVATMSIVFMIAIITKSNVCTVVSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ALFMLAITASLNSKAPIPSIVSFVFPFIVCEKALARFASNLDIIIAIISSVAIFTITTLI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SLLYVKHKDIK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA