Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is yvbK [H]

Identifier: 170757654

GI number: 170757654

Start: 1088766

End: 1089209

Strand: Direct

Name: yvbK [H]

Synonym: CLD_3586

Alternate gene names: 170757654

Gene position: 1088766-1089209 (Clockwise)

Preceding gene: 170757277

Following gene: 170755848

Centisome position: 27.51

GC content: 28.38

Gene sequence:

>444_bases
ATGGAAATCAAAATAATAGAAGAGAATAAAAGAAGTTTTTTAGATTTATTACTTTTAGCGGATGAACAAGAAAGTATGAT
TGATAAATATCTAAACCGTGGGGAAATGTTTGCTCTATATGATGGAGATTTAAAAAGTATTTGTGTAGTAACTAATGAAG
AGGAAGGCATATATGAGATAAAGAATCTAGCAACATATGAAAAATATCAGGGACAAGGGTATGGAAGCCGATTAATTAAG
TTTATATTTGAATATTATAAGGATAATTGCAAAACAATGCTTGTAGGGACTGGAGATAGCCCATTGACGATTCCCTTTTA
TAAGCATTGTGGATTTAAAGTTTCTCATAGAATTAAAAATTTTTTCACTGATAATTATGACCATCCTATTTATGAAAGTG
AAGTTCAACTAATTGATATGGTTTATTTGAAAAAAGATTTCTAA

Upstream 100 bases:

>100_bases
GAACATAGTATAATAAAATTAGGATTTAGTACATATTTGCGTTTAATTATAAATGTAAAATAAAAAGAAGTAAAGCTTAT
TTACGTAATAGGGGGATACC

Downstream 100 bases:

>100_bases
AGATTTTGAAAATAATCCTTATTAAATTTATGTTTATTGTTCTTATTTTTATAATTATGGATGGGCTATATATAAAATAG
TACAAAAAGAAAGGAAGTGA

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MEIKIIEENKRSFLDLLLLADEQESMIDKYLNRGEMFALYDGDLKSICVVTNEEEGIYEIKNLATYEKYQGQGYGSRLIK
FIFEYYKDNCKTMLVGTGDSPLTIPFYKHCGFKVSHRIKNFFTDNYDHPIYESEVQLIDMVYLKKDF

Sequences:

>Translated_147_residues
MEIKIIEENKRSFLDLLLLADEQESMIDKYLNRGEMFALYDGDLKSICVVTNEEEGIYEIKNLATYEKYQGQGYGSRLIK
FIFEYYKDNCKTMLVGTGDSPLTIPFYKHCGFKVSHRIKNFFTDNYDHPIYESEVQLIDMVYLKKDF
>Mature_147_residues
MEIKIIEENKRSFLDLLLLADEQESMIDKYLNRGEMFALYDGDLKSICVVTNEEEGIYEIKNLATYEKYQGQGYGSRLIK
FIFEYYKDNCKTMLVGTGDSPLTIPFYKHCGFKVSHRIKNFFTDNYDHPIYESEVQLIDMVYLKKDF

Specific function: Probable N-acetyltransferase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 17366; Mature: 17366

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKIIEENKRSFLDLLLLADEQESMIDKYLNRGEMFALYDGDLKSICVVTNEEEGIYEI
CEEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHH
KNLATYEKYQGQGYGSRLIKFIFEYYKDNCKTMLVGTGDSPLTIPFYKHCGFKVSHRIKN
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHCCCHHHHHHHH
FFTDNYDHPIYESEVQLIDMVYLKKDF
HHCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEIKIIEENKRSFLDLLLLADEQESMIDKYLNRGEMFALYDGDLKSICVVTNEEEGIYEI
CEEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHH
KNLATYEKYQGQGYGSRLIKFIFEYYKDNCKTMLVGTGDSPLTIPFYKHCGFKVSHRIKN
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHCCCHHHHHHHH
FFTDNYDHPIYESEVQLIDMVYLKKDF
HHCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]