| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755848
Identifier: 170755848
GI number: 170755848
Start: 1089362
End: 1089955
Strand: Direct
Name: 170755848
Synonym: CLD_3585
Alternate gene names: NA
Gene position: 1089362-1089955 (Clockwise)
Preceding gene: 170757654
Following gene: 170757135
Centisome position: 27.52
GC content: 31.14
Gene sequence:
>594_bases ATGTTTAGATTTAATACGAAAGAATGTAAATGGTTCTTTGAACCTAAGAATTATTTAATAGAAGAGGATAAGGTTGAAAT AATAACAGAGCCTAACACTGATTTTTGGCAAAGAACCTATTATGGATTTAGAAATGATAATGCTCATGTTCTTTATGTTA CAACAGATGAAGAATATTTTTCCTTTACGGTAAAGACAGATTTTAATAGTACAGCATTATTTGATCAATGTGGACTTGCC ATTTATCAAAATAGTGAAAATTGGGCCAAGGCATGTATTGAGTTTCATGATAATAATACTTCATGGCTTGGAAGTGTTGT AACTAATCATGGGTATTCTGATTGGGCAACTATGGATATTGGATCATCTGTAAAATCTATGTGGTATAGGTTAAGTAGGA GAGGGAGTGATTACTGTTTTGAAAATTCCTTTGATGGTGTAAACTTTAAACAAATGAGAATTTTCCACTTATTTGAAGGA GCAAAAGAAATTAATTTTGGTTTGCTTGCATGTTCACCAAGCAAAAATTCTTTTAAGGCTACATTTACTGAAATGAAAAT AACAGATTGTCTATGGGAAGAGCACAAAGCATAA
Upstream 100 bases:
>100_bases AATTATGGATGGGCTATATATAAAATAGTACAAAAAGAAAGGAAGTGAGTATTTAGTAGGGTTGTGTAATTGTAGTACAC TCTCTTGCTAAAGATAAATT
Downstream 100 bases:
>100_bases TTTTAGGAAGGGATGATATAAACATATAATACTGCTCCTTATATGACATACTGTTGTCATAATTGATTTGATATTATATA AGCAAGAAAATTATAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MFRFNTKECKWFFEPKNYLIEEDKVEIITEPNTDFWQRTYYGFRNDNAHVLYVTTDEEYFSFTVKTDFNSTALFDQCGLA IYQNSENWAKACIEFHDNNTSWLGSVVTNHGYSDWATMDIGSSVKSMWYRLSRRGSDYCFENSFDGVNFKQMRIFHLFEG AKEINFGLLACSPSKNSFKATFTEMKITDCLWEEHKA
Sequences:
>Translated_197_residues MFRFNTKECKWFFEPKNYLIEEDKVEIITEPNTDFWQRTYYGFRNDNAHVLYVTTDEEYFSFTVKTDFNSTALFDQCGLA IYQNSENWAKACIEFHDNNTSWLGSVVTNHGYSDWATMDIGSSVKSMWYRLSRRGSDYCFENSFDGVNFKQMRIFHLFEG AKEINFGLLACSPSKNSFKATFTEMKITDCLWEEHKA >Mature_197_residues MFRFNTKECKWFFEPKNYLIEEDKVEIITEPNTDFWQRTYYGFRNDNAHVLYVTTDEEYFSFTVKTDFNSTALFDQCGLA IYQNSENWAKACIEFHDNNTSWLGSVVTNHGYSDWATMDIGSSVKSMWYRLSRRGSDYCFENSFDGVNFKQMRIFHLFEG AKEINFGLLACSPSKNSFKATFTEMKITDCLWEEHKA
Specific function: Unknown
COG id: COG3506
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322244, Length=184, Percent_Identity=32.0652173913043, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23259; Mature: 23259
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFNTKECKWFFEPKNYLIEEDKVEIITEPNTDFWQRTYYGFRNDNAHVLYVTTDEEYF CCCCCCCCCEEEECCCCCEECCCCEEEEECCCCCHHHHHHCCEECCCEEEEEEEECCCEE SFTVKTDFNSTALFDQCGLAIYQNSENWAKACIEFHDNNTSWLGSVVTNHGYSDWATMDI EEEEEECCCCCCHHHHCCEEEEECCCHHHEEEEEEECCCCCEEHHHHHCCCCCCEEEEEC GSSVKSMWYRLSRRGSDYCFENSFDGVNFKQMRIFHLFEGAKEINFGLLACSPSKNSFKA CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCEEEEEECCCCCCEEE TFTEMKITDCLWEEHKA EEEHHHHHHHHHHHCCC >Mature Secondary Structure MFRFNTKECKWFFEPKNYLIEEDKVEIITEPNTDFWQRTYYGFRNDNAHVLYVTTDEEYF CCCCCCCCCEEEECCCCCEECCCCEEEEECCCCCHHHHHHCCEECCCEEEEEEEECCCEE SFTVKTDFNSTALFDQCGLAIYQNSENWAKACIEFHDNNTSWLGSVVTNHGYSDWATMDI EEEEEECCCCCCHHHHCCEEEEECCCHHHEEEEEEECCCCCEEHHHHHCCCCCCEEEEEC GSSVKSMWYRLSRRGSDYCFENSFDGVNFKQMRIFHLFEGAKEINFGLLACSPSKNSFKA CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCEEEEEECCCCCCEEE TFTEMKITDCLWEEHKA EEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA