| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757643
Identifier: 170757643
GI number: 170757643
Start: 2487615
End: 2488037
Strand: Reverse
Name: 170757643
Synonym: CLD_2274
Alternate gene names: NA
Gene position: 2488037-2487615 (Counterclockwise)
Preceding gene: 170757217
Following gene: 170756059
Centisome position: 62.86
GC content: 32.86
Gene sequence:
>423_bases ATGAAAATTATTTATTGGAGTCAAACAGGAAATACAGAGAAGATGGCAAACTTGATACTAGAAGGAATAGAATCAGAAGG TGAAAAAGCTGAATTAGTAGAAGTATCATCAGTATCACTTAATGATGTGAAAAATGAAAAAATACTTATTTTAGGATGTC CAGCATCTGGAGCAGAAGAATTAGAAGAAAGTGAAATGGAGCCTTTTATTAAATCATTAGAAGGAAACATACAAGGAAAA AAAGTTGCACTTTTTGGTTCATGGGGATGGGGCAATGGCGAATGGATGACAGAATGGGAAAAGAAAATGGAATCATTTGG AGCTATACTAATAAGCGAAGGTTTAACAGTGCAAGAATATCCAGAAGGAGAAAATGAAGGCAAATGCATAAGTTTTGGAA AATTAATAGTAAAATCACAATAA
Upstream 100 bases:
>100_bases AGGAATACAAGGAATAAGATATTCAATTGAGTCTATGTCTCGACTTAAATCAACTGTAATAAATTTTAGAAGTAGATAAT AAAATTTAGGAGGAATTCAT
Downstream 100 bases:
>100_bases ATATCTAAAATTATGTATATCAATTTTATAATAATTAAATGCTTTATACATTTACAGTAGTCAAGAGTGGACGCACTCTT GATTACTGCTTATTATTATA
Product: flavodoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEELEESEMEPFIKSLEGNIQGK KVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEYPEGENEGKCISFGKLIVKSQ
Sequences:
>Translated_140_residues MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEELEESEMEPFIKSLEGNIQGK KVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEYPEGENEGKCISFGKLIVKSQ >Mature_140_residues MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEELEESEMEPFIKSLEGNIQGK KVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEYPEGENEGKCISFGKLIVKSQ
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010087 - InterPro: IPR008254 - InterPro: IPR001226 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 15495; Mature: 15495
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEE CEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHH LEESEMEPFIKSLEGNIQGKKVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEY HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCCEEEEC PEGENEGKCISFGKLIVKSQ CCCCCCCCEEEECEEEEECC >Mature Secondary Structure MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEE CEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHH LEESEMEPFIKSLEGNIQGKKVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEY HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCCEEEEC PEGENEGKCISFGKLIVKSQ CCCCCCCCEEEECEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 4843142; 4843141; 9063874 [H]