| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is mutL
Identifier: 170757624
GI number: 170757624
Start: 1914712
End: 1916712
Strand: Reverse
Name: mutL
Synonym: CLD_2841
Alternate gene names: 170757624
Gene position: 1916712-1914712 (Counterclockwise)
Preceding gene: 170755080
Following gene: 170756578
Centisome position: 48.42
GC content: 25.29
Gene sequence:
>2001_bases ATGAGGAAAATAAATTTATTAGATTTAGAAACTACAAATAAAATAGCTGCAGGAGAAGTTATAGAAAGACCCTTTTCTGT AGTAAAAGAATTAGTAGAAAATAGTATAGATGCCGGTGCCAAAAATATAACCATAGAAATAGAAGATGGAGGACAAAAGC TTATAAAGATAATAGATGATGGAGAAGGTATTTATCCTATTGATATAAAAAATGCTTTTCTTCCTCATGCTACAAGTAAA ATAAATTCTATAGAGGATATATACAAAATAAGTACTATGGGCTTTAGAGGTGAAGCACTAGCTAGCATTTCTTCCGTATC AAAAACTAAACTTAAAAGTAGAGTTGACTCTTATAATTTTGGAAAAGAAATATATATAGAGGGTGGCAAAATAGAGTACT TAAAAGATACAGGTTGCAATGTTGGCACTACTATAGAAGTTTCTGATTTATTTTATAATGTCCCTGCAAGACTTAAATTT TTGAAAAGTGCAAGAAGTGATAGTAGTTCTATATCAGATATTGTGAATAGGTTTATATTAGCCCATCCAGATATATCTTT TAATTTAATAAATAAGGGAAAGCAAAGTATAAAGAGTTATGGTACCGGAAATTTAAAGGACTCTATACGATGTGTATATA ATAAAACAATAAGTGAAAACCTTATAAACTTCGAAAGTCATAAAGATATAATATCTGTATATGGATTTATAGGTAAGACT GAAATAAGCCGTAAAAGCAGAACAAATCAAAGTATATTTGTAAACAAGCGATATGTTAAAAGTAAATTTATAACTGCTGC AGTAGAAAATGCTTTTAAATCCTTTTTAACAGTAAATAGCTATCCTTTCTTTGTAATATTTATAGATATTTTTCCGGAAT ATATTGATGTAAATGTACATCCTACTAAATCAGAAGTTAAATTTAAAGATGAGAGAGCAATGTTTAAAACTATATTTGAT GCAGTTCATGAAGCTATAAAAGGAGAATTAAAAGAATCTTTTACAAACTTCTTTAATAAAGAAGATATTAATATATATGA TTCTGAAAAATCTATAACTGAACCCATAAAACTAGAGAAAGAAGAAGTACAAATACCAATAGATTTAAATAGTAATAATA AAATTGATATTTTTGGTAATAATATAAATAAACTACCTAACAATACAGAACTTCTTAAAAATATAGGTGTTAAAGCAAAA AATACACTTGAAAATAATAATGATTTCTATACTTCTAAACAAAATGAAATATACTATGCTAATAAAAATGATGAATGTTT AAATTCATGTAATAAAGATAACTATAGCAAAATAGAAAAGTCATTACAAAAAGATAATAAAAATCCAGATACCTTATATC TAAATGAGCATAATACAAATTCTTCATCTATAAATATTAAAGAAAATAAACCTAATAATTTTTATGTAGATATGAAAATA ATAGGACAGTTTAATAATACATATATATTAATAGAAAAGGATAAAGAACTTTATATAATAGATCAACATGCAGCTCATGA AAAAGTGTTATTTGAGAAATTCAAATCCGAAATAGAAAAAGGATATGTAATAAGTCAGATTTTATTATCTCCTGTAGTTA TAGAACTTTCAGAAGATGAATTTAATATATACGAAGAAAACAAGGATATTTTTAAGAATTCGGGTTTTTCAGTGGAAACT TTTGGAGAATACACTATAAATATAAAAGAAGTACCTTTAATTCTAGGTAAACCCAATGTAGAAAATCTCTTTATGGATAT ACTTTATAATTTAAAAAATATGAAGTCTAAAGAAACTTCTACAATAAAATATAATGCCATTGCTACACTGGCATGCAAAT CCGCAGTTAAAGCTAATGACAACTTAAAAGAAGAAGAAATAAAAAAATTAATAGAAGACATGCTTATATTAAATAATCCA TATACTTGTCCCCATGGAAGACCTACTATGATTAAATTTACATTAAAAGATTTAGAAAAAAAATTTAAAAGAATACAATG A
Upstream 100 bases:
>100_bases ATATTAATACATACAAAATCCTATAATTTTTATTAACCTAGTACCATTTATAAGTGGTACTAATCTATATAATAAAATTA TAAGCTATGTGGTGATTTAA
Downstream 100 bases:
>100_bases GGGGGATAAGGAAAAATGATAGATTTATTAATAATTGCAGGTCCTACAGCAGTAGGGAAAACAGATATTTCCATAAAACT TGCAGAAAAACTAAATGGAG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 666; Mature: 666
Protein sequence:
>666_residues MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYPIDIKNAFLPHATSK INSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKF LKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKT EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFD AVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGVKAK NTLENNNDFYTSKQNEIYYANKNDECLNSCNKDNYSKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKI IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVET FGEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNP YTCPHGRPTMIKFTLKDLEKKFKRIQ
Sequences:
>Translated_666_residues MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYPIDIKNAFLPHATSK INSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKF LKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKT EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFD AVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGVKAK NTLENNNDFYTSKQNEIYYANKNDECLNSCNKDNYSKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKI IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVET FGEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNP YTCPHGRPTMIKFTLKDLEKKFKRIQ >Mature_666_residues MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYPIDIKNAFLPHATSK INSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKF LKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKT EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFD AVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGVKAK NTLENNNDFYTSKQNEIYYANKNDECLNSCNKDNYSKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKI IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVET FGEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNP YTCPHGRPTMIKFTLKDLEKKFKRIQ
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=330, Percent_Identity=34.2424242424242, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI4505911, Length=357, Percent_Identity=28.8515406162465, Blast_Score=145, Evalue=2e-34, Organism=Homo sapiens, GI189458898, Length=357, Percent_Identity=28.8515406162465, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI4505913, Length=344, Percent_Identity=26.453488372093, Blast_Score=133, Evalue=7e-31, Organism=Homo sapiens, GI310128478, Length=344, Percent_Identity=26.453488372093, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI189458896, Length=355, Percent_Identity=28.7323943661972, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI263191589, Length=241, Percent_Identity=29.4605809128631, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI310128480, Length=299, Percent_Identity=24.0802675585284, Blast_Score=96, Evalue=2e-19, Organism=Homo sapiens, GI91992162, Length=459, Percent_Identity=25.2723311546841, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI91992160, Length=459, Percent_Identity=25.2723311546841, Blast_Score=92, Evalue=2e-18, Organism=Escherichia coli, GI1790612, Length=597, Percent_Identity=29.1457286432161, Blast_Score=239, Evalue=5e-64, Organism=Caenorhabditis elegans, GI71991825, Length=322, Percent_Identity=32.2981366459627, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17562796, Length=351, Percent_Identity=28.2051282051282, Blast_Score=140, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323819, Length=333, Percent_Identity=36.036036036036, Blast_Score=200, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6324247, Length=353, Percent_Identity=30.3116147308782, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6323063, Length=348, Percent_Identity=26.1494252873563, Blast_Score=92, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6325093, Length=756, Percent_Identity=22.8835978835979, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI17136968, Length=334, Percent_Identity=33.5329341317365, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI17136970, Length=357, Percent_Identity=25.2100840336134, Blast_Score=117, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 76159; Mature: 76159
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1 ; PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDD CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC GEGIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNF CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFIL CCEEEEECCEEEEEECCCCCCCCEEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHEE AHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKT ECCCCEEEHHHHHHHHHHHCCCCCCHHHHHEEHHCHHHHHHHCCCHHHHHHHHHHHHCCC EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVH HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCHHEEEEC PTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEK CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECC EEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGVKAKNTLENNNDFYTSKQNEIYYA CCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEE NKNDECLNSCNKDNYSKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKI CCCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEE IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDE EECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCC FNIYEENKDIFKNSGFSVETFGEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETS CEEEECCHHHHHCCCCEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCC TIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEK EEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHH KFKRIQ HHHHCC >Mature Secondary Structure MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDD CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC GEGIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNF CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFIL CCEEEEECCEEEEEECCCCCCCCEEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHEE AHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKT ECCCCEEEHHHHHHHHHHHCCCCCCHHHHHEEHHCHHHHHHHCCCHHHHHHHHHHHHCCC EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVH HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCHHEEEEC PTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEK CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECC EEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGVKAKNTLENNNDFYTSKQNEIYYA CCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEE NKNDECLNSCNKDNYSKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKI CCCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEE IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDE EECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCC FNIYEENKDIFKNSGFSVETFGEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETS CEEEECCHHHHHCCCCEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCC TIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEK EEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHH KFKRIQ HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA