Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757550

Identifier: 170757550

GI number: 170757550

Start: 2837293

End: 2837712

Strand: Reverse

Name: 170757550

Synonym: CLD_1908

Alternate gene names: NA

Gene position: 2837712-2837293 (Counterclockwise)

Preceding gene: 170754574

Following gene: 170756722

Centisome position: 71.69

GC content: 24.29

Gene sequence:

>420_bases
ATGTCATTTAAAATTATAAATGGTAAATTACATTTAGTAGAAGATTATAATTATGCATCCTTAAAAAATAAAAATATTAA
AAGTGAACATAAAGTAGGAAGCTTTGAAGAATTATTAAACAAGAAACTAAATGACAATGATAAAATCAATAATAAAAATA
AGGAAGAAAGTTTTATAATATCAAAGCATGCCTTTGATAGGTTAAAATCTAGAAATATAAATCTATCAGAAGAAGATATG
AATAGTATAAATAAAGCTATAAATATAGCCGATAAGAAGGGAAGCAGGGAGTGCTTAATATTATGCAAGGATGCAGCTTT
AATAACCTCTATAAAGAATAGAACAATAATAACAGCTATGACAAAGGAAGAAAGTAAGGATAATGTTTTTACAAATATAG
ATAGTGCGGTAATAATATAA

Upstream 100 bases:

>100_bases
GTGACTTTGGTGATATTGAAAATCCAGGTAAAAAGCCTTCTGAGGGAGGAGAAGAAGATAAAACCGGAGTAGAAGAGAAA
AAATAAGGATGTGGAAAAAT

Downstream 100 bases:

>100_bases
GCTGGACCTTTTTAGGAAGCTTTACTTTGTAGAATGAAGGATACAAAGTTATTACCCCTTAAAAAATTGGAGGAATTTTA
TATGTTAAGATCAATGTATT

Product: flagellar operon protein

Products: NA

Alternate protein names: Flagellar Hook Associated Protein

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSFKIINGKLHLVEDYNYASLKNKNIKSEHKVGSFEELLNKKLNDNDKINNKNKEESFIISKHAFDRLKSRNINLSEEDM
NSINKAINIADKKGSRECLILCKDAALITSIKNRTIITAMTKEESKDNVFTNIDSAVII

Sequences:

>Translated_139_residues
MSFKIINGKLHLVEDYNYASLKNKNIKSEHKVGSFEELLNKKLNDNDKINNKNKEESFIISKHAFDRLKSRNINLSEEDM
NSINKAINIADKKGSRECLILCKDAALITSIKNRTIITAMTKEESKDNVFTNIDSAVII
>Mature_138_residues
SFKIINGKLHLVEDYNYASLKNKNIKSEHKVGSFEELLNKKLNDNDKINNKNKEESFIISKHAFDRLKSRNINLSEEDMN
SINKAINIADKKGSRECLILCKDAALITSIKNRTIITAMTKEESKDNVFTNIDSAVII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15845; Mature: 15714

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKIINGKLHLVEDYNYASLKNKNIKSEHKVGSFEELLNKKLNDNDKINNKNKEESFII
CCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHEEE
SKHAFDRLKSRNINLSEEDMNSINKAINIADKKGSRECLILCKDAALITSIKNRTIITAM
HHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCCEEEEEECCHHHHHHCCCCEEEEEE
TKEESKDNVFTNIDSAVII
CCCCCCCCEEECCCCEEEC
>Mature Secondary Structure 
SFKIINGKLHLVEDYNYASLKNKNIKSEHKVGSFEELLNKKLNDNDKINNKNKEESFII
CEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHEEE
SKHAFDRLKSRNINLSEEDMNSINKAINIADKKGSRECLILCKDAALITSIKNRTIITAM
HHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCCEEEEEECCHHHHHHCCCCEEEEEE
TKEESKDNVFTNIDSAVII
CCCCCCCCEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA