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The map label for this gene is 170757542

Identifier: 170757542

GI number: 170757542

Start: 2890141

End: 2890806

Strand: Reverse

Name: 170757542

Synonym: CLD_1852

Alternate gene names: NA

Gene position: 2890806-2890141 (Counterclockwise)

Preceding gene: 170757334

Following gene: 170756742

Centisome position: 73.03

GC content: 34.68

Gene sequence:

>666_bases
ATGAAGGTATTAGTAATAGCAGTTCACCCAGACGATGAAACTTTAGGATGTGGAGGAACTATATTAAAACATGTTGATAA
TAATGATGAAGTTCATTGGTTGATTTTAACTGATGTTCTGGAAGAGTACGGTTACTCAAAGGAGCATATCAATAGAGAAT
ATAAGATAGTTGAGTCGGTGAAAGATGCATATGGGTTCAAGGATGTGATGAATGTAGGGTTTCCAGCCGGCAATATTCAT
TTGATAAGTTTTGAAAAAATCATTGATGGAATATCTGAATTCATAAACAAGATAAAACCAGAAATAATATACATGCCTAA
CCGGTCAGACATACATACTGATCATCAAATAGCAGTCAAGGCCATTTGGAGTTGCACTAAAGCTTTCAGATATCCTTTCA
TTAAAAAGATACTTATGTATGAATGTGTTTCGGAAACTGATGCGGCACCTGCCTTGCCGGAAAATGTTTTCATACCTAAT
GTATTTTCGGATATTACTGAATACATAGATAAAAAAATAGAGATATTGAAGTTATATGATTCTGAAATAGGACTTCCTCC
TTTTCCAAGGTCAATTGACAATATAATGGCATTAGCCAGATACAGGGGAAGCAGTGTTTCCAGACAATTTGCTGAAGCAT
TCATGTTGGTTAGAGACATATGTTAA

Upstream 100 bases:

>100_bases
AGGTAATAGGAGATTGTCCTATAGTAAAGTGCTATGACAGTTTGATTAAATTGGTTGAATATGAGCCGCGGATAACTTTA
AAGGAAGGTGAATACTTGTA

Downstream 100 bases:

>100_bases
AGGAGAGTTCATAATGAGAAAAGTATGTGTAGTTACAGGAACAAGAGCAGAATATGGATTGCTTAGAAACATATTGGTGA
AAATAAAGGATTCAAATAAT

Product: LmbE family protein

Products: NA

Alternate protein names: LmbE-Like Protein; GlcNAc-PI De-N-Acetylase Family Protein; Lmbe Family Protein; GlcNAc-PI De-N-Acetylase Family; N-Acetylglucosaminylphosphatidylinositol Deacetylase; LmbE-Like Protein Family Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKVLVIAVHPDDETLGCGGTILKHVDNNDEVHWLILTDVLEEYGYSKEHINREYKIVESVKDAYGFKDVMNVGFPAGNIH
LISFEKIIDGISEFINKIKPEIIYMPNRSDIHTDHQIAVKAIWSCTKAFRYPFIKKILMYECVSETDAAPALPENVFIPN
VFSDITEYIDKKIEILKLYDSEIGLPPFPRSIDNIMALARYRGSSVSRQFAEAFMLVRDIC

Sequences:

>Translated_221_residues
MKVLVIAVHPDDETLGCGGTILKHVDNNDEVHWLILTDVLEEYGYSKEHINREYKIVESVKDAYGFKDVMNVGFPAGNIH
LISFEKIIDGISEFINKIKPEIIYMPNRSDIHTDHQIAVKAIWSCTKAFRYPFIKKILMYECVSETDAAPALPENVFIPN
VFSDITEYIDKKIEILKLYDSEIGLPPFPRSIDNIMALARYRGSSVSRQFAEAFMLVRDIC
>Mature_221_residues
MKVLVIAVHPDDETLGCGGTILKHVDNNDEVHWLILTDVLEEYGYSKEHINREYKIVESVKDAYGFKDVMNVGFPAGNIH
LISFEKIIDGISEFINKIKPEIIYMPNRSDIHTDHQIAVKAIWSCTKAFRYPFIKKILMYECVSETDAAPALPENVFIPN
VFSDITEYIDKKIEILKLYDSEIGLPPFPRSIDNIMALARYRGSSVSRQFAEAFMLVRDIC

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25276; Mature: 25276

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVIAVHPDDETLGCGGTILKHVDNNDEVHWLILTDVLEEYGYSKEHINREYKIVESV
CEEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHCCCHHHHCHHHHHHHHH
KDAYGFKDVMNVGFPAGNIHLISFEKIIDGISEFINKIKPEIIYMPNRSDIHTDHQIAVK
HHHHCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHH
AIWSCTKAFRYPFIKKILMYECVSETDAAPALPENVFIPNVFSDITEYIDKKIEILKLYD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
SEIGLPPFPRSIDNIMALARYRGSSVSRQFAEAFMLVRDIC
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLVIAVHPDDETLGCGGTILKHVDNNDEVHWLILTDVLEEYGYSKEHINREYKIVESV
CEEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHCCCHHHHCHHHHHHHHH
KDAYGFKDVMNVGFPAGNIHLISFEKIIDGISEFINKIKPEIIYMPNRSDIHTDHQIAVK
HHHHCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHH
AIWSCTKAFRYPFIKKILMYECVSETDAAPALPENVFIPNVFSDITEYIDKKIEILKLYD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
SEIGLPPFPRSIDNIMALARYRGSSVSRQFAEAFMLVRDIC
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA