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The map label for this gene is yuxH [H]

Identifier: 170757521

GI number: 170757521

Start: 565973

End: 567184

Strand: Reverse

Name: yuxH [H]

Synonym: CLD_0294

Alternate gene names: 170757521

Gene position: 567184-565973 (Counterclockwise)

Preceding gene: 170754264

Following gene: 170755905

Centisome position: 14.33

GC content: 23.68

Gene sequence:

>1212_bases
TTGGATACATTTGTTGCTAGACAACCTATTTTTGATATAAATGAAAATGTAGTAGCCTATGAATTATTATTTAGAACTAA
TAATGAAAATAATGAATTTATAAATATAGATGGAGATATAGCAACCTCTAAAGTAATAATTAACAGCTTTCTATTAATTG
GTATAAAAAATTTAACTAATGGTAAAAAAGCTTTTATCAACTTTACAGAAAATCTTATTTTAGATGATATAGCCTCACTT
CTCCCAAAAGAATATGTAACAATAGAAATTCTAGAAAATGTAACTCCCTCTAAAGCTATAATATGTTCCTGTAAAAACCT
AAAACAAGAAGGATATACTATAGCATTAGATGATTTTGTCTTAATGGATAATTTAAAAGAATTAATAGAATTAGCGGATA
TTATAAAAATAGATTTTACTATTACTAAAGGTGATGAACGAAAAGAAATTATAGATAAAATACTTAAAATAAATAACAAA
ATAAAATTTCTAGCTGAAAAGATTGAAACTAGAGAAGAATTTACTGAGGCTGCTTCTATGGGATATTCTCTATTTCAAGG
GTATTTTTTTAGCAAGCCCACTATATTTAACGAAAGAGATATTCCTATACATAGCATTACCAAATACAAAATCTTAAAAG
AAATAAATAAAGAAGATATAGATTTTAACTATCTAGAAGAATTAATTAAAACAGACTTATCCTTATATTACAAACTACTA
AAATTTATAAATTCTTCTTTTTCTCTAAAAAGAAGTATAACCTCTGTAAAAAAGGCTATAACTTTAATTGGTGAAAAACA
AACTATAAGATTTATTTCATTTATATTAGTATACGATATAACAAGCAACAACAAAGAATATGTAAAGACAACCTTAGTAA
GAGCAAAATTTCTAGATCTTTTATCTGAAAAAACAAATTATATAAATAAGTCAGATGAATTATTTTTTATGGGACTATTT
TATGGGATAGAAGACTTTTTAAATAAACCCTTAAAAGATATTTTACATGATCTTCCTATATCCCAAGATACCAAATCCGC
TCTTCTCGGTAAAAAAAATAAGCTAAATTATATACTTAATCTTGTATTAAACTATGAAAAAGGTGAATGGAAAAAAGTTA
ATGATATATGTAAACATCTGAATATATATCCTAATGAATTAACTACTATTTATATAAATGCTCTAAATTGGACAAATAAA
TTTAATCTTTAA

Upstream 100 bases:

>100_bases
AAATTAAAATTATTATCCAGCATTTATATGATTTAGTAGACTTATGTTTATTATATATATTAGAATATACTTAAAATAAA
CTTTTATTGGGGGAATTTTT

Downstream 100 bases:

>100_bases
ATTCTTTATAATAATTTAATTTTATAAATAAAAAGTATAAGATATAATTTTTATAATAAAATTTTATCTTATACTTTTTT
ATATTCACCTATTATATTTC

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTNGKKAFINFTENLILDDIASL
LPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFVLMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNK
IKFLAEKIETREEFTEAASMGYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
KFINSSFSLKRSITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDLLSEKTNYINKSDELFFMGLF
YGIEDFLNKPLKDILHDLPISQDTKSALLGKKNKLNYILNLVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNK
FNL

Sequences:

>Translated_403_residues
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTNGKKAFINFTENLILDDIASL
LPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFVLMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNK
IKFLAEKIETREEFTEAASMGYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
KFINSSFSLKRSITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDLLSEKTNYINKSDELFFMGLF
YGIEDFLNKPLKDILHDLPISQDTKSALLGKKNKLNYILNLVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNK
FNL
>Mature_403_residues
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTNGKKAFINFTENLILDDIASL
LPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFVLMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNK
IKFLAEKIETREEFTEAASMGYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
KFINSSFSLKRSITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDLLSEKTNYINKSDELFFMGLF
YGIEDFLNKPLKDILHDLPISQDTKSALLGKKNKLNYILNLVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNK
FNL

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 46813; Mature: 46813

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTN
CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
GKKAFINFTENLILDDIASLLPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFV
CCCEEHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHEEEEHHHHHHCCCEEEEHHHH
LMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNKIKFLAEKIETREEFTEAASM
HHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KFINSSFSLKRSITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDL
HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH
LSEKTNYINKSDELFFMGLFYGIEDFLNKPLKDILHDLPISQDTKSALLGKKNKLNYILN
HHHHHHCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHH
LVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNKFNL
HHEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTN
CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
GKKAFINFTENLILDDIASLLPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFV
CCCEEHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHEEEEHHHHHHCCCEEEEHHHH
LMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNKIKFLAEKIETREEFTEAASM
HHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KFINSSFSLKRSITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDL
HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH
LSEKTNYINKSDELFFMGLFYGIEDFLNKPLKDILHDLPISQDTKSALLGKKNKLNYILN
HHHHHHCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHH
LVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNKFNL
HHEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]