| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is thiE
Identifier: 170754264
GI number: 170754264
Start: 567449
End: 568066
Strand: Reverse
Name: thiE
Synonym: CLD_0293
Alternate gene names: 170754264
Gene position: 568066-567449 (Counterclockwise)
Preceding gene: 170755281
Following gene: 170757521
Centisome position: 14.35
GC content: 30.26
Gene sequence:
>618_bases ATGGAAATAAATTATGAACTTTATTTAATTACAGATAGAAGATTTTTAAAAGGGCGTCAATTAAAAAAAGTAGTGGAAGA CGCTATCCTAGGAGGAGTAACTATAGTACAAGTTAGAGAAAAAGATGTATCTACTAGAGAATTTTATAATATAGCTAAAG AAGTAAAGGAAGTAACAGACTATTACAAGGTGCCTATAATTATAAATGATAGATTAGATATTGCTCAAGCTATAGATGCT AGCGGCGTTCATCTGGGTCAAAAGGACATGCATCTTAATATAGCTAGAGAAATTTTAGGTAAGGATAAAATAATAGGCAT ATCTGTAGGAAATGTTAAAGAGGCCTTGGAAGCACAAAATAATGGAGCAGATTATCTAGGAATAGGAACTATATTCCCTA CAGGTAGCAAAAAAGATGTAGATGCAATCATTGGTATTGATGGACTATCAAAAATAAAAGATAGCATATCTATCCCTTCT GTAGCTATAGGTGGCATAAATAAAACTAACTTTAAAGATGTTTTAAAAACTGGCATAGAAGGAATTTCTGTAATTTCAGC TATATTAGATGAAGATGATATAAAACTTGCTGCTAACAATCTTTTAATAAATAAATAA
Upstream 100 bases:
>100_bases CATACGAAAAAGCACAACTACCAGGTAGTTTTAGAATTGCTTTAATAGATAATATATATATGATATCTGATGAAGAAATT TGGGAAAGAGGTAATGTAGA
Downstream 100 bases:
>100_bases TTATCTTTATTTGTTATTTTAACTAAAAATAGATTTAATTTTAATATAACAAAGATAAAAAATATCAGTGTATTTTTTAT TCTGGCAATGTTAGAATTAA
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MEINYELYLITDRRFLKGRQLKKVVEDAILGGVTIVQVREKDVSTREFYNIAKEVKEVTDYYKVPIIINDRLDIAQAIDA SGVHLGQKDMHLNIAREILGKDKIIGISVGNVKEALEAQNNGADYLGIGTIFPTGSKKDVDAIIGIDGLSKIKDSISIPS VAIGGINKTNFKDVLKTGIEGISVISAILDEDDIKLAANNLLINK
Sequences:
>Translated_205_residues MEINYELYLITDRRFLKGRQLKKVVEDAILGGVTIVQVREKDVSTREFYNIAKEVKEVTDYYKVPIIINDRLDIAQAIDA SGVHLGQKDMHLNIAREILGKDKIIGISVGNVKEALEAQNNGADYLGIGTIFPTGSKKDVDAIIGIDGLSKIKDSISIPS VAIGGINKTNFKDVLKTGIEGISVISAILDEDDIKLAANNLLINK >Mature_205_residues MEINYELYLITDRRFLKGRQLKKVVEDAILGGVTIVQVREKDVSTREFYNIAKEVKEVTDYYKVPIIINDRLDIAQAIDA SGVHLGQKDMHLNIAREILGKDKIIGISVGNVKEALEAQNNGADYLGIGTIFPTGSKKDVDAIIGIDGLSKIKDSISIPS VAIGGINKTNFKDVLKTGIEGISVISAILDEDDIKLAANNLLINK
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=184, Percent_Identity=30.9782608695652, Blast_Score=76, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6325042, Length=220, Percent_Identity=40.4545454545455, Blast_Score=149, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 22421; Mature: 22421
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINYELYLITDRRFLKGRQLKKVVEDAILGGVTIVQVREKDVSTREFYNIAKEVKEVTD CCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHH YYKVPIIINDRLDIAQAIDASGVHLGQKDMHLNIAREILGKDKIIGISVGNVKEALEAQN HEECCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCC NGADYLGIGTIFPTGSKKDVDAIIGIDGLSKIKDSISIPSVAIGGINKTNFKDVLKTGIE CCCCEEEEEEEECCCCCCCCCEEEECCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCH GISVISAILDEDDIKLAANNLLINK HHHHHHHHHCCCCCEEEECEEEECC >Mature Secondary Structure MEINYELYLITDRRFLKGRQLKKVVEDAILGGVTIVQVREKDVSTREFYNIAKEVKEVTD CCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHH YYKVPIIINDRLDIAQAIDASGVHLGQKDMHLNIAREILGKDKIIGISVGNVKEALEAQN HEECCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCC NGADYLGIGTIFPTGSKKDVDAIIGIDGLSKIKDSISIPSVAIGGINKTNFKDVLKTGIE CCCCEEEEEEEECCCCCCCCCEEEECCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCH GISVISAILDEDDIKLAANNLLINK HHHHHHHHHCCCCCEEEECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA