Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is spoIIIAA [H]

Identifier: 170757502

GI number: 170757502

Start: 2020257

End: 2021180

Strand: Reverse

Name: spoIIIAA [H]

Synonym: CLD_2742

Alternate gene names: 170757502

Gene position: 2021180-2020257 (Counterclockwise)

Preceding gene: 170754834

Following gene: 170754591

Centisome position: 51.06

GC content: 29.33

Gene sequence:

>924_bases
TTGTATACAGAAGAGATTCTAAATATACTTCCAAGTCATATAAGTAGATTAATATGTGATTTAGATGAAGTAGATAAACT
TCAAGAAATAAGGTTTAAAATTGGGAAACCTATATTTTTCCAAATAGGCAATACAGAGAAACTTGCATCTTATGAAGTGA
AAAGAGAGGATATAAAATCTATAGTTCAAAGAATGAGTAATTATTCTATTTATAGTTTTGAAGAAGAAATAAAACAGGGA
TATCTAACTATAAAAGGCGGTCATAGAGTTGGCATATGTGGTAGATGTGTAATAGATGAAGGCAAAGTTAAAACTATAAG
AGATATAAGTTCCTTAAATATAAGAATTTGTAGAGAAATATATAATGCCTCAAAGCTAGTTATGCCCTATATAGTAGAAA
ATGGACATGTTTTAAATACTATAATAATTTCTCCTCCTAAATGTGGAAAGACCACTATAATAAGGGATATATCTAAAAAA
ATATCTGACGGAGTGGATGCGTTAAATTTAAAAGGAAAAAAGGTATCTGTTATAGATGAAAGAAGTGAAATAGCTGGGAG
CTATAATGGTGTTCCTCAATTAGATGTAGGTTTAAGGACGGATGTCTTAGATAATTGTCCTAAAAGTGAAGGCATAGTAA
TGGCTATAAGAAGTATGGCACCAGAAGTAATAATATGTGATGAAATAGGAACCTATAATGATGTAGAAAGTATACTTATC
GCTTTAAATTCAGGAGTCAGCCTGATAACAACCATACATGGCTTTGGAGTAGAAGATATTTACAATAGACCCGTTTTTAA
AGAAATAGTAGAAAATAAAGTTTTTAAAAGAGCTATAGTTTTAAGCTCTAAAAAATCTGTAGGTACTTTAGAGTATGTAT
ATGATTTTAATAAGAAAACCAAGCTTTACTGTAGGATAATTTAA

Upstream 100 bases:

>100_bases
AATAAAACAAAGGAGGAATTAGTAATTATTTTAATAAAGTTTTTGGAATAATTTTGTTAAGTTTGAAATAGATATTTTAT
AAAGAAAGGAGATGATAAAT

Downstream 100 bases:

>100_bases
TAAAAACTTTTCTTAGAAATAGGAGTGTACAAAACTATGTTTAAAATTTTAGGAAGTTTATTAATTTTTGTTGGAAGTTT
ATATTGGGGTATAACTACTG

Product: stage III sporulation protein AA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MYTEEILNILPSHISRLICDLDEVDKLQEIRFKIGKPIFFQIGNTEKLASYEVKREDIKSIVQRMSNYSIYSFEEEIKQG
YLTIKGGHRVGICGRCVIDEGKVKTIRDISSLNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKK
ISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGLRTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILI
ALNSGVSLITTIHGFGVEDIYNRPVFKEIVENKVFKRAIVLSSKKSVGTLEYVYDFNKKTKLYCRII

Sequences:

>Translated_307_residues
MYTEEILNILPSHISRLICDLDEVDKLQEIRFKIGKPIFFQIGNTEKLASYEVKREDIKSIVQRMSNYSIYSFEEEIKQG
YLTIKGGHRVGICGRCVIDEGKVKTIRDISSLNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKK
ISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGLRTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILI
ALNSGVSLITTIHGFGVEDIYNRPVFKEIVENKVFKRAIVLSSKKSVGTLEYVYDFNKKTKLYCRII
>Mature_307_residues
MYTEEILNILPSHISRLICDLDEVDKLQEIRFKIGKPIFFQIGNTEKLASYEVKREDIKSIVQRMSNYSIYSFEEEIKQG
YLTIKGGHRVGICGRCVIDEGKVKTIRDISSLNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKK
ISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGLRTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILI
ALNSGVSLITTIHGFGVEDIYNRPVFKEIVENKVFKRAIVLSSKKSVGTLEYVYDFNKKTKLYCRII

Specific function: Unknown

COG id: COG3854

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014217 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34563; Mature: 34563

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTEEILNILPSHISRLICDLDEVDKLQEIRFKIGKPIFFQIGNTEKLASYEVKREDIKS
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
IVQRMSNYSIYSFEEEIKQGYLTIKGGHRVGICGRCVIDEGKVKTIRDISSLNIRICREI
HHHHHHCCCEEEHHHHHHCCEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
YNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDE
HCCCCEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEECC
RSEIAGSYNGVPQLDVGLRTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILI
HHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEHHHCCCEEEECCCCCCHHHHHHHH
ALNSGVSLITTIHGFGVEDIYNRPVFKEIVENKVFKRAIVLSSKKSVGTLEYVYDFNKKT
HHCCCCEEEEEHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCE
KLYCRII
EEEEEEC
>Mature Secondary Structure
MYTEEILNILPSHISRLICDLDEVDKLQEIRFKIGKPIFFQIGNTEKLASYEVKREDIKS
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
IVQRMSNYSIYSFEEEIKQGYLTIKGGHRVGICGRCVIDEGKVKTIRDISSLNIRICREI
HHHHHHCCCEEEHHHHHHCCEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
YNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDE
HCCCCEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEECC
RSEIAGSYNGVPQLDVGLRTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILI
HHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEHHHCCCEEEECCCCCCHHHHHHHH
ALNSGVSLITTIHGFGVEDIYNRPVFKEIVENKVFKRAIVLSSKKSVGTLEYVYDFNKKT
HHCCCCEEEEEHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCE
KLYCRII
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766372; 8969508; 9384377 [H]